RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 C8orf76Q96K31 380 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 CNOT6LQ96LI5 555 aaKnown RBP10.32□□□□□ -0.76
RFFL-203ENST00000413582 IPO9Q96P70 1041 aaKnown RBP10.32□□□□□ -0.76
RFFL-203ENST00000413582 RPF1Q9H9Y2 349 aaKnown RBP10.32□□□□□ -0.76
RFFL-203ENST00000413582 EVLQ9UI08 416 aaPredicted RBP10.32□□□□□ -0.76
RFFL-203ENST00000413582 DSEQ9UL01 958 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 WNT6Q9Y6F9 365 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 ADAMTS20P59510 1910 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 IGSF10Q6WRI0 2623 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 ANTXRLA6NF34 631 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 HNRNPDLO14979 420 aaKnown RBP10.31□□□□□ -0.76
RFFL-203ENST00000413582 CD2BP2O95400 341 aaKnown RBP10.31□□□□□ -0.76
RFFL-203ENST00000413582 PIGRP01833 764 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 DHPSP49366 369 aaPredicted RBP10.31□□□□□ -0.76
RFFL-203ENST00000413582 LIG4P49917 911 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 SLC12A3P55017 1021 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 FAM160A1Q05DH4 1040 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 TMEM132DQ14C87 1099 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 IL17AQ16552 155 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 EML3Q32P44 896 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 SDHAF4Q5VUM1 108 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 WSCD1Q658N2 575 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 ANO7Q6IWH7 933 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 HSCBQ8IWL3 235 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 CD302Q8IX05 232 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 ATP2A3Q93084 1043 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 FAM212AQ96EL1 285 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 SLC22A12Q96S37 553 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 PYM1Q9BRP8 204 aaKnown RBP10.31□□□□□ -0.76
RFFL-203ENST00000413582 CCSER1Q9C0I3 900 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 TMEM206Q9H813 350 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 TMLHEQ9NVH6 421 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 DUS2Q9NX74 493 aaKnown RBP10.31□□□□□ -0.76
RFFL-203ENST00000413582 KCNG1Q9UIX4 513 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 CPSF3Q9UKF6 684 aaKnown RBP10.31□□□□□ -0.76
RFFL-203ENST00000413582 KLK13Q9UKR3 277 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 NOL7Q9UMY1 257 aaKnown RBP10.31□□□□□ -0.76
RFFL-203ENST00000413582 MSRB2Q9Y3D2 182 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 PCDHB6Q9Y5E3 794 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 PCDH15Q96QU1 1955 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 ADAMTS9Q9P2N4 1935 aa10.31□□□□□ -0.76
RFFL-203ENST00000413582 GCN1Q92616 2671 aaKnown RBP10.3□□□□□ -0.76
RFFL-203ENST00000413582 SMG1Q96Q15 3661 aaKnown RBP10.3□□□□□ -0.76
RFFL-203ENST00000413582 A0A0B4J269 797 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 NPHP3-ACAD11A0A0J9YXS1 232 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 SPAARA0A1B0GVQ0 90 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 H0YCG3 227 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 TAF4O00268 1085 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 CYB561D2O14569 222 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 CSH1P0DML2 217 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 CSH2P0DML3 217 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 CHRM1P11229 460 aaPredicted RBP10.3□□□□□ -0.76
RFFL-203ENST00000413582 HNRNPLP14866 589 aaKnown RBP eCLIP10.3□□□□□ -0.76
RFFL-203ENST00000413582 PRPHP41219 470 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 IFNAR2P48551 515 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 TAF6P49848 677 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 TOB1P50616 345 aaPredicted RBP10.3□□□□□ -0.76
RFFL-203ENST00000413582 LMAN2Q12907 356 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 GAB4Q2WGN9 574 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 TRIM61Q5EBN2 209 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 HYIQ5T013 277 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 SLC39A4Q6P5W5 647 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 PIP4P1Q86T03 277 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 METTL23Q86XA0 190 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 SYT2Q8N9I0 419 aaPredicted RBP10.3□□□□□ -0.76
RFFL-203ENST00000413582 FBXO18Q8NFZ0 1043 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 OLIG1Q8TAK6 271 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 LEO1Q8WVC0 666 aaPredicted RBP10.3□□□□□ -0.76
RFFL-203ENST00000413582 PIGKQ92643 395 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 ZSCAN31Q96LW9 406 aaPredicted RBP10.3□□□□□ -0.76
RFFL-203ENST00000413582 PNMA5Q96PV4 448 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 KCND2Q9NZV8 630 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 LARSQ9P2J5 1176 aaKnown RBP10.3□□□□□ -0.76
RFFL-203ENST00000413582 MMP17Q9ULZ9 603 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 MAGED2Q9UNF1 606 aaPredicted RBP10.3□□□□□ -0.76
RFFL-203ENST00000413582 LIMCH1Q9UPQ0 1083 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 DERAQ9Y315 318 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 PCDHB5Q9Y5E4 795 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 CEP192Q8TEP8 1941 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 MYOFQ9NZM1 2061 aa10.3□□□□□ -0.76
RFFL-203ENST00000413582 LAMA5O15230 3695 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 SETXQ7Z333 2677 aaKnown RBP10.29□□□□□ -0.76
RFFL-203ENST00000413582 TRAV19A0A0A6YYK7 116 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 K7ELQ4 463 aaPredicted RBP10.29□□□□□ -0.76
RFFL-203ENST00000413582 K7ENM7 598 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 K7EQS6 105 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 LAD1O00515 517 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 TNFRSF10BO14763 440 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 PRPF40AO75400 957 aaKnown RBP10.29□□□□□ -0.76
RFFL-203ENST00000413582 NOL4O94818 638 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 CKMP06732 381 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 OPRD1P41143 372 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 P2RY2P41231 377 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 MAPK8P45983 427 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 SEC13P55735 322 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 SIM1P81133 766 aaPredicted RBP10.29□□□□□ -0.76
RFFL-203ENST00000413582 ZRSR1Q15695 479 aaKnown RBP10.29□□□□□ -0.76
RFFL-203ENST00000413582 CRY1Q16526 586 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 C2orf27AQ580R0 203 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 EFCAB13Q8IY85 973 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms