RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 SHOC2Q9UQ13 582 aa12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 DICER1Q9UPY3 1922 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 DNM1LO00429 736 aa12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 IFNB1P01574 187 aa12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 CETPP11597 493 aa12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 RDXP35241 583 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 ACAP1Q15027 740 aa12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 JADE1Q6IE81 842 aa12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 XYLT1Q86Y38 959 aa12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 CPXM1Q96SM3 734 aa12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 TMEM121Q9BTD3 319 aa12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 EURLQ9NYK6 297 aa12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 NKIRAS1Q9NYS0 192 aa12.08□□□□□ -0.48
TRAFD1-202ENST00000412615 A0A087WZ62 844 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 EXOC1LA0A1B0GW35 172 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 CILPO75339 1184 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 RNF8O76064 485 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 LGALS2P05162 132 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 KDELR1P24390 212 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 HNRNPH1P31943 449 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 ARHGAP1Q07960 439 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 RNASEH2BQ5TBB1 312 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 BBS12Q6ZW61 710 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 ARFGAP1Q8N6T3 406 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 CKAP2Q8WWK9 683 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 FDXACB1Q9BRP7 624 aaPredicted RBP12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 SMYD3Q9H7B4 428 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 TJP2Q9UDY2 1190 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 TCP11X1B4DZS4 312 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 ALOX15BO15296 676 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 SNX3O60493 162 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 CST8O60676 142 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 MICAL2O94851 1124 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 HMGCRP04035 888 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 ERBB2P04626 1255 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 VDRP11473 427 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 IL1R2P27930 398 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 STX2P32856 288 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 GABRB2P47870 512 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 SCTRP47872 440 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 OTUD4Q01804 1114 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 MYO1EQ12965 1108 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 TAZQ16635 292 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 AMHR2Q16671 573 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 SMTNL2Q2TAL5 461 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 KCNT1Q5JUK3 1230 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 PPP1R21Q6ZMI0 780 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 ARMCX2Q7L311 632 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 TDRPQ86YL5 185 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 SRRM1Q8IYB3 904 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 KIAA0319LQ8IZA0 1049 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 ACTL9Q8TC94 416 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 TWNKQ96RR1 684 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 ELOVL4Q9GZR5 314 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 PDZD7Q9H5P4 517 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 PPCSQ9HAB8 311 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 METTL5Q9NRN9 209 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 AKT3Q9Y243 479 aa12.07□□□□□ -0.48
TRAFD1-202ENST00000412615 RASA4BC9J798 803 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 RASA4O43374 803 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 GH1P01241 217 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 DYNLT1P63172 113 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 MKRN3Q13064 507 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 ORC1Q13415 861 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 MPP2Q14168 576 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 CCDC142Q17RM4 750 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 SLC10A6Q3KNW5 377 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 TTC39CQ8N584 583 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 EMC1Q8N766 993 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 LINC01465Q8N7H1 131 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 KCTD6Q8NC69 237 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 CMASQ8NFW8 434 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 CXorf38Q8TB03 319 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 MAML1Q92585 1016 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 MCRS1Q96EZ8 462 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 HPDLQ96IR7 371 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 HEXIM2Q96MH2 286 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 UBN1Q9NPG3 1134 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 FOXO6A8MYZ6 492 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 M0QYV0 167 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 CSDE1O75534 798 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 ARF4P18085 180 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 GPD2P43304 727 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 TMEM132DQ14C87 1099 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 TMED2Q15363 201 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 SPRED3Q2MJR0 410 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 NUGGCQ68CJ6 796 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 ZBED8Q8IZ13 594 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 RSAD2Q8WXG1 361 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 PRCCQ92733 491 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 SGSM3Q96HU1 749 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 FAM124BQ9H5Z6 455 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 VPS37BQ9H9H4 285 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 ASNSD1Q9NWL6 643 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 RNF181Q9P0P0 153 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 KIAA1257Q9ULG3 409 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 AGAP1Q9UPQ3 857 aa12.06□□□□□ -0.48
TRAFD1-202ENST00000412615 USP15Q9Y4E8 981 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms