RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 GPD1LQ8N335 351 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 RIT2Q99578 217 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 SLC39A3Q9BRY0 314 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 TBC1D10AQ9BXI6 508 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 NOL6Q9H6R4 1146 aaKnown RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CYP4F11Q9HBI6 524 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 PKD2L2Q9NZM6 624 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 COQ6Q9Y2Z9 468 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 NWD1Q149M9 1564 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 IQANK1A0A1B0GTG1 560 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 A6NHS1 94 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 MIF4GDA9UHW6 222 aaKnown RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 ENTPD5O75356 428 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 GH1P01241 217 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 C6orf222P0C671 652 aaPredicted RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 XRRA1Q6P2D8 792 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 DHRS1Q96LJ7 313 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 ECSITQ9BQ95 431 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 MXRA8Q9BRK3 442 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 EDEM3Q9BZQ6 932 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 ADARB2Q9NS39 739 aaKnown RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 KCNH4Q9UQ05 1017 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 RWDD3Q9Y3V2 267 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 MROH1Q8NDA8 1641 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 MFN2O95140 757 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 PGM3O95394 542 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 ACTN1P12814 892 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 CCDC130P13994 396 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 IDO1P14902 403 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 PSMA2P25787 234 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 INPP1P49441 399 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 RPS6P62753 249 aaKnown RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 DNAJC3Q13217 504 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 TRIP13Q15645 432 aaPredicted RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 DUOXA2Q1HG44 320 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 PPP6R3Q5H9R7 873 aaPredicted RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 SPDYCQ5MJ68 293 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 C4orf50Q6ZRC1 276 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 USP49Q70CQ1 688 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 TCAIMQ8N3R3 496 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 SCFD2Q8WU76 684 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 MCRS1Q96EZ8 462 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 MYLK2Q9H1R3 596 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 TRABDQ9H4I3 376 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 GPBP1L1Q9HC44 474 aaPredicted RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 ETNK2Q9NVF9 386 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 STX18Q9P2W9 335 aaKnown RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 RSL24D1Q9UHA3 163 aaKnown RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 MAD2L2Q9UI95 211 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 ARHGAP26Q9UNA1 814 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 UBE2Q2LH0YL09 131 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 AREL1O15033 823 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 FOXP2O15409 715 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 TRMUO75648 421 aaKnown RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 ALOX5P09917 674 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 SRGAP2BP0DMP2 458 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 XPAP23025 273 aaPredicted RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 CIITAP33076 1130 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 DRAP1Q14919 205 aaPredicted RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 CDO1Q16878 200 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 ARL13BQ3SXY8 428 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 NXNQ6DKJ4 435 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 DARS2Q6PI48 645 aaKnown RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 CDH24Q86UP0 819 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 GALNT4Q8N4A0 578 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 TRPC4APQ8TEL6 797 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 HPS3Q969F9 1004 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 CORO1BQ9BR76 489 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 TSSK1BQ9BXA7 367 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 STK33Q9BYT3 514 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 INTS2Q9H0H0 1204 aaKnown RBP8.87□□□□□ -0.99
PBRM1-209ENST00000412587 ANAPC7Q9UJX3 599 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 DOLKQ9UPQ8 538 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 SPEF1Q9Y4P9 236 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 EMSYQ7Z589 1322 aa8.87□□□□□ -0.99
PBRM1-209ENST00000412587 RNF103-CHMP3A0A140T963 221 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 SSU72P8A0A1W2PR75 194 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 CCDC162PA2VCL2 907 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 PRKCBP05771 671 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 AMPD2Q01433 879 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 BNIP1Q12981 228 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 TJAP1Q5JTD0 557 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 ANKRD40Q6AI12 368 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 SMYD1Q8NB12 490 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 FBXL13Q8NEE6 735 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 ATP8B4Q8TF62 1192 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 C7orf25Q9BPX7 421 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 SYT15Q9BQS2 421 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 DCUN1D5Q9BTE7 237 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 IPO11Q9UI26 975 aaKnown RBP8.86□□□□□ -0.99
PBRM1-209ENST00000412587 SLC12A4Q9UP95 1085 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 RBMX2Q9Y388 322 aaKnown RBP8.86□□□□□ -0.99
PBRM1-209ENST00000412587 LRRC42Q9Y546 428 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 NPHP3-ACAD11A0A0J9YXS1 232 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 C5orf60A6NFR6 353 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 A8MUI8 341 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 FAM25AB3EWG3 89 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 FAM25CB3EWG5 89 aa8.86□□□□□ -0.99
PBRM1-209ENST00000412587 FAM25GB3EWG6 89 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms