RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 FKBP3Q00688 224 aaKnown RBP20.12■□□□□ 0.81
TRIM56-202ENST00000412507 CYP27A1Q02318 531 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 ENPEPQ07075 957 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 MDH1BQ5I0G3 518 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 SPOPLQ6IQ16 392 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 SCN4BQ8IWT1 228 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 ZC3H3Q8IXZ2 948 aaKnown RBP20.12■□□□□ 0.81
TRIM56-202ENST00000412507 SIX5Q8N196 739 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 ZSCAN18Q8TBC5 510 aaPredicted RBP20.12■□□□□ 0.81
TRIM56-202ENST00000412507 MYCBPAPQ8TBZ2 947 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 ELSPBP1Q96BH3 223 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 ASB16Q96NS5 453 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 GPR88Q9GZN0 384 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 SDCBP2Q9H190 292 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 MFSD1Q9H3U5 465 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 IL21Q9HBE4 155 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 ZFP14Q9HCL3 533 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.12■□□□□ 0.816e-6■■■■■ 48.1
TRIM56-202ENST00000412507 SLC2A4RGQ9NR83 387 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 COL4A2P08572 1712 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 MYO16Q9Y6X6 1858 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 PSMA7O14818 248 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 ASS1P00966 412 aaKnown RBP20.11■□□□□ 0.81
TRIM56-202ENST00000412507 HMGA1P17096 107 aaKnown RBP20.11■□□□□ 0.81
TRIM56-202ENST00000412507 PTPN1P18031 435 aaKnown RBP20.11■□□□□ 0.81
TRIM56-202ENST00000412507 MCCD1P59942 119 aaPredicted RBP20.11■□□□□ 0.81
TRIM56-202ENST00000412507 CYP4F8P98187 520 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 LRRC63Q05C16 580 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 MORC3Q14149 939 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 MAPRE1Q15691 268 aaKnown RBP20.11■□□□□ 0.81
TRIM56-202ENST00000412507 KLHL10Q6JEL2 608 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 TAS1R2Q8TE23 839 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 TAF4BQ92750 862 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 SMARCD2Q92925 531 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 PCED1BQ96HM7 432 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 DHTKD1Q96HY7 919 aaPredicted RBP20.11■□□□□ 0.81
TRIM56-202ENST00000412507 TMEM8AQ9HCN3 771 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 MAGED2Q9UNF1 606 aaPredicted RBP20.11■□□□□ 0.81
TRIM56-202ENST00000412507 PATJQ8NI35 1801 aa20.11■□□□□ 0.81
TRIM56-202ENST00000412507 KRBA1A5PL33 1030 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 PPP1R3GB7ZBB8 358 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 CSH1P0DML2 217 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 CSH2P0DML3 217 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 P4HA1P13674 534 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 BDNFP23560 247 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 CDC25CP30307 473 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 VIPR2P41587 438 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 MAGEA11P43364 429 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 CAMK4Q16566 473 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 GPR158Q5T848 1215 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 GPIHBP1Q8IV16 184 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 FLCNQ8NFG4 579 aa20.1■□□□□ 0.81
TRIM56-202ENST00000412507 WDFY4Q6ZS81 3184 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 SLC38A8A6NNN8 435 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 SLC16A3O15427 465 aaKnown RBP20.09■□□□□ 0.81
TRIM56-202ENST00000412507 LRRN2O75325 713 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 F11P03951 625 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 NPR3P17342 541 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 AVPR2P30518 371 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 PPP1R2P41236 205 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 GRM2Q14416 872 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 ARHGAP15Q53QZ3 475 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 IER5LQ5T953 404 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 KRT39Q6A163 491 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 B3GALNT2Q8NCR0 500 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 GCNAQ96QF7 691 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 TRPV4Q9HBA0 871 aa20.09■□□□□ 0.81
TRIM56-202ENST00000412507 NCANO14594 1321 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 NOL4O94818 638 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 GTF2H1P32780 548 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 GRIK1P39086 918 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 ASPAP45381 313 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 NLRP12P59046 1061 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 NOP14P78316 857 aaKnown RBP20.08■□□□□ 0.81
TRIM56-202ENST00000412507 DCAF17Q5H9S7 520 aaPredicted RBP20.08■□□□□ 0.81
TRIM56-202ENST00000412507 TCERG1LQ5VWI1 586 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 CWF19L1Q69YN2 538 aaKnown RBP20.08■□□□□ 0.81
TRIM56-202ENST00000412507 VSTM1Q6UX27 236 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 VITQ6UXI7 678 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 TMEM150AQ86TG1 271 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 NELFBQ8WX92 580 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 B3GNT5Q9BYG0 378 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 IMPG2Q9BZV3 1241 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 APOBEC3GQ9HC16 384 aaKnown RBP20.08■□□□□ 0.81
TRIM56-202ENST00000412507 ARHGEF3Q9NR81 526 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 KIAA1468Q9P260 1216 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 CTNND2Q9UQB3 1225 aa20.08■□□□□ 0.81
TRIM56-202ENST00000412507 CLDN5O00501 218 aa20.07■□□□□ 0.8
TRIM56-202ENST00000412507 STK25O00506 426 aa20.07■□□□□ 0.8
TRIM56-202ENST00000412507 STX10O60499 249 aa20.07■□□□□ 0.8
TRIM56-202ENST00000412507 MXI1P50539 228 aa20.07■□□□□ 0.8
TRIM56-202ENST00000412507 ORC1Q13415 861 aa20.07■□□□□ 0.8
TRIM56-202ENST00000412507 ASTLQ6HA08 431 aaPredicted RBP20.07■□□□□ 0.8
TRIM56-202ENST00000412507 ARID3BQ8IVW6 561 aaPredicted RBP20.07■□□□□ 0.8
TRIM56-202ENST00000412507 SEMA4DQ92854 862 aa20.07■□□□□ 0.8
TRIM56-202ENST00000412507 RSPRY1Q96DX4 576 aa20.07■□□□□ 0.8
TRIM56-202ENST00000412507 DUSP9Q99956 384 aaKnown RBP20.07■□□□□ 0.8
TRIM56-202ENST00000412507 BCO2Q9BYV7 579 aa20.07■□□□□ 0.8
TRIM56-202ENST00000412507 ZNF518BQ9C0D4 1074 aa20.07■□□□□ 0.8
TRIM56-202ENST00000412507 TASP1Q9H6P5 420 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms