RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 COL20A1Q9P218 1284 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 GPR34Q9UPC5 381 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 FRMD4BQ9Y2L6 1034 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 ZNF536O15090 1300 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 PNPLA7Q6ZV29 1317 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 A0A1W2PPH5 198 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 BICDL2A1A5D9 508 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 TOR1BO14657 336 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 MFAP3LO75121 409 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 ZBED4O75132 1171 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 IPO13O94829 963 aaKnown RBP5.13□□□□□ -1.59
BRCA1-204ENST00000412061 GJB1P08034 283 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 MYL4P12829 197 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 HDCP19113 662 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 GALNSP34059 522 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 CNR2P34972 360 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 DCAF7P61962 342 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 EXOSC9Q06265 439 aaKnown RBP5.13□□□□□ -1.59
BRCA1-204ENST00000412061 MAPK7Q13164 816 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 TRPC3Q13507 836 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 KIF22Q14807 665 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 UBXN2BQ14CS0 331 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 CFAP58Q5T655 872 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 ATXN7L2Q5T6C5 722 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-204ENST00000412061 FAM205BPQ63HN1 556 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 SULT6B1Q6IMI4 303 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 FBXO38Q6PIJ6 1188 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 ZNF365Q70YC5 407 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 BEND5Q7L4P6 421 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 GPRIN1Q7Z2K8 1008 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 PDSS2Q86YH6 399 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 OR6B3Q8NGW1 331 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 STYXQ8WUJ0 223 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 IQCDQ96DY2 449 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 GNRHR2Q96P88 292 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 P2RX7Q99572 595 aaKnown RBP5.13□□□□□ -1.59
BRCA1-204ENST00000412061 TRIM54Q9BYV2 358 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 DHX36Q9H2U1 1008 aaKnown RBP5.13□□□□□ -1.59
BRCA1-204ENST00000412061 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-204ENST00000412061 HECAQ9UBI9 543 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-204ENST00000412061 AFF4Q9UHB7 1163 aaKnown RBP5.13□□□□□ -1.59
BRCA1-204ENST00000412061 MED16Q9Y2X0 877 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 DUSP10Q9Y6W6 482 aa5.13□□□□□ -1.59
BRCA1-204ENST00000412061 A0A087X0M5 115 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 A0A1B0GX30 115 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 FAM170AA1A519 330 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 NPEPPSL1A6NEC2 478 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 PODXLO00592 558 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 TNFRSF6BO95407 300 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 ANXA1P04083 346 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 GNAI2P04899 355 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 RARBP10826 455 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 GLULP15104 373 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 BMP7P18075 431 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 SLC6A4P31645 630 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 PHKA1P46020 1223 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 ARFIP2P53365 341 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 RPS16P62249 146 aaKnown RBP5.12□□□□□ -1.59
BRCA1-204ENST00000412061 NOMO3P69849 1222 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 TLE2Q04725 743 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 HABP2Q14520 560 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-204ENST00000412061 KRT32Q14532 448 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 DLGAP5Q15398 846 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 ELAVL1Q15717 326 aaKnown RBP5.12□□□□□ -1.59
BRCA1-204ENST00000412061 CDC37Q16543 378 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-204ENST00000412061 ADCK5Q3MIX3 580 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 METTL24Q5JXM2 366 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 EFCAB12Q6NXP0 572 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 ZNF783Q6ZMS7 281 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 ENOSF1Q7L5Y1 443 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 C2CD5Q86YS7 1000 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 NKAIN3Q8N8D7 197 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 ANKRD52Q8NB46 1076 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 FANCBQ8NB91 859 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 FEZF2Q8TBJ5 459 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 FAM71BQ8TC56 605 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 STT3BQ8TCJ2 826 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 IPO4Q8TEX9 1081 aaKnown RBP5.12□□□□□ -1.59
BRCA1-204ENST00000412061 HERVK_113Q902F9 699 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 ST8SIA2Q92186 375 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 ZMAT2Q96NC0 199 aaKnown RBP5.12□□□□□ -1.59
BRCA1-204ENST00000412061 GSTO2Q9H4Y5 243 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 SPON1Q9HCB6 807 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 ZCCHC17Q9NP64 241 aaKnown RBP5.12□□□□□ -1.59
BRCA1-204ENST00000412061 SERHLQ9NQF3 203 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 TM7SF3Q9NS93 570 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 FBXO34Q9NWN3 711 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 PAXBP1Q9Y5B6 917 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.12□□□□□ -1.59
BRCA1-204ENST00000412061 SLC30A1Q9Y6M5 507 aa5.12□□□□□ -1.59
BRCA1-204ENST00000412061 A0A0B4J269 797 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 PRSS29PA6NIE9 313 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 TSPY2A6NKD2 308 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 PIP5K1BO14986 540 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 AHCYL1O43865 530 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 TBC1D4O60343 1298 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 RAD17O75943 681 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 TSPY3P0CV98 308 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 TSPY8P0CW00 308 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 ZSCAN22P10073 491 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms