RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 HESX1Q9UBX0 185 aa21.44■■□□□ 1.02
PTPA-208ENST00000411917 TSPAN16Q9UKR8 245 aa21.44■■□□□ 1.02
PTPA-208ENST00000411917 YBX2Q9Y2T7 364 aaKnown RBP21.44■■□□□ 1.02
PTPA-208ENST00000411917 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.44■■□□□ 1.02
PTPA-208ENST00000411917 VWA8A3KMH1 1905 aa21.44■■□□□ 1.02
PTPA-208ENST00000411917 MYBPHLA2RUH7 354 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 GRXCR1A8MXD5 290 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 H3BNC9 293 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 RTN2O75298 545 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 MICAL2O94851 1124 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 GPD2P43304 727 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 MAGEA11P43364 429 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 GSCP56915 257 aaPredicted RBP21.43■■□□□ 1.02
PTPA-208ENST00000411917 SLC8A3P57103 927 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 BST2Q10589 180 aaKnown RBP21.43■■□□□ 1.02
PTPA-208ENST00000411917 LRIT3Q3SXY7 679 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 VSTM1Q6UX27 236 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 PHF13Q86YI8 300 aaPredicted RBP21.43■■□□□ 1.02
PTPA-208ENST00000411917 C12orf29Q8N999 325 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 SPPL3Q8TCT6 385 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 SPPL2BQ8TCT7 592 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 RIN2Q8WYP3 895 aaPredicted RBP21.43■■□□□ 1.02
PTPA-208ENST00000411917 TRIM11Q96F44 468 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 PCED1BQ96HM7 432 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 NOX5Q96PH1 765 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 ADGRG1Q9Y653 693 aa21.43■■□□□ 1.02
PTPA-208ENST00000411917 TNRC18O15417 2968 aaPredicted RBP21.43■■□□□ 1.02
PTPA-208ENST00000411917 FSCN2O14926 492 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 CCP110O43303 1012 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 HCRTO43612 131 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 ACAT1P24752 427 aaKnown RBP21.42■■□□□ 1.02
PTPA-208ENST00000411917 SNX16P57768 344 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 PTPN14Q15678 1187 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 MDH1BQ5I0G3 518 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 TAF3Q5VWG9 929 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 ACAD10Q6JQN1 1059 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 PAQR9Q6ZVX9 377 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 RTL10Q7L3V2 364 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 MSANTD4Q8NCY6 345 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 FBXO22Q8NEZ5 403 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 SLC2A14Q8TDB8 520 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 SMARCD1Q96GM5 515 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 HSFY1Q96LI6 401 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 PCDHB18PQ96TA0 734 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 C17orf80Q9BSJ5 609 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.42■■□□□ 1.02
PTPA-208ENST00000411917 DUSP16Q9BY84 665 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 B3GNT5Q9BYG0 378 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 PDCL3Q9H2J4 239 aa21.42■■□□□ 1.02
PTPA-208ENST00000411917 TMEM265A0A087WTH1 108 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 ZNF263O14978 683 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 XPO1O14980 1071 aaKnown RBP21.41■■□□□ 1.02
PTPA-208ENST00000411917 CCDC175P0C221 793 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 MYBL1P10243 752 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 NPR3P17342 541 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 PLA2G4AP47712 749 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 NDUFV1P49821 464 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 PSMC1P62191 440 aaKnown RBP21.41■■□□□ 1.02
PTPA-208ENST00000411917 GFPT1Q06210 699 aaPredicted RBP21.41■■□□□ 1.02
PTPA-208ENST00000411917 C1QBPQ07021 282 aaKnown RBP21.41■■□□□ 1.02
PTPA-208ENST00000411917 ORC1Q13415 861 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 RAB33AQ14088 237 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 FAM35AQ86V20 835 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 LRRTM3Q86VH5 581 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 SLC35F5Q8WV83 523 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 MYLPFQ96A32 169 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 CALR3Q96L12 384 aaKnown RBP21.41■■□□□ 1.02
PTPA-208ENST00000411917 CLSTN3Q9BQT9 956 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 TLR9Q9NR96 1032 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 AFF4Q9UHB7 1163 aaKnown RBP21.41■■□□□ 1.02
PTPA-208ENST00000411917 GTF3C4Q9UKN8 822 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 ZKSCAN5Q9Y2L8 839 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 PDE4DIPQ5VU43 2346 aa21.41■■□□□ 1.02
PTPA-208ENST00000411917 ANKRD62A6NC57 917 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 BTNL10A8MVZ5 291 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 M0QYV0 167 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 ATP2C2O75185 946 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 ABLIM3O94929 683 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 ARHGEF15O94989 841 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 FAM200BP0CF97 657 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 MYOGP15173 224 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 MMP8P22894 467 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 NSFP46459 744 aaKnown RBP21.4■■□□□ 1.02
PTPA-208ENST00000411917 GABRB2P47870 512 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 SMC1AQ14683 1233 aaKnown RBP21.4■■□□□ 1.02
PTPA-208ENST00000411917 MTF1Q14872 753 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 TCEAL1Q15170 157 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 GOLGA7BQ2TAP0 167 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 TTC30AQ86WT1 665 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 PALB2Q86YC2 1186 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 ZNF461Q8TAF7 563 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 KCTD13Q8WZ19 329 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 ZNF830Q96NB3 372 aaPredicted RBP21.4■■□□□ 1.02
PTPA-208ENST00000411917 FAM49BQ9NUQ9 324 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 PCDHB5Q9Y5E4 795 aa21.4■■□□□ 1.02
PTPA-208ENST00000411917 RANBP2P49792 3224 aaKnown RBP21.4■■□□□ 1.02
PTPA-208ENST00000411917 NLRC5Q86WI3 1866 aa21.39■■□□□ 1.02
PTPA-208ENST00000411917 PJA2O43164 708 aa21.39■■□□□ 1.01
PTPA-208ENST00000411917 ZSCAN12O43309 604 aa21.39■■□□□ 1.01
PTPA-208ENST00000411917 CCDC130P13994 396 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms