RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 PROZP22891 400 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 RPS6KB1P23443 525 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 RPA1P27694 616 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 NMT1P30419 496 aaKnown RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TIE1P35590 1138 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 OPRD1P41143 372 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 GRIA2P42262 883 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PDE6CP51160 858 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PEX3P56589 373 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 LILRA4P59901 499 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 RPL10AP62906 217 aaKnown RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PPP2R3AQ06190 1150 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 STRN3Q13033 797 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 KCNB1Q14721 858 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ZBTB6Q15916 424 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 NFE2Q16621 373 aaPredicted RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 KYAT1Q16773 422 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 EML3Q32P44 896 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SLC10A6Q3KNW5 377 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 MAP7D1Q3KQU3 841 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PLEKHG6Q3KR16 790 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PREPLQ4J6C6 727 aaPredicted RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SLC39A12Q504Y0 691 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SEZ6Q53EL9 994 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 BMP2KLQ5H9B9 411 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 EARS2Q5JPH6 523 aaKnown RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 WDR45BQ5MNZ6 344 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SYCP2LQ5T4T6 812 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 LARP1BQ659C4 914 aaKnown RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 HAUS3Q68CZ6 603 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TXNDC8Q6A555 127 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 MPZL3Q6UWV2 235 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TMEM92Q6UXU6 159 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ZPBP2Q6X784 338 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 LRRC69Q6ZNQ3 347 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 NUDT18Q6ZVK8 323 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 GPR155Q7Z3F1 870 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TMEM150AQ86TG1 271 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SLCO6A1Q86UG4 719 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 NAXDQ8IW45 347 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 EFCAB13Q8IY85 973 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 DCP1BQ8IZD4 617 aaKnown RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 RGL4Q8IZJ4 473 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF843Q8N446 348 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 DEFB119Q8N690 84 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ALLCQ8N6M5 410 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 FRMD1Q8N878 549 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PDCD7Q8N8D1 485 aaKnown RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 KIAA1958Q8N8K9 716 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TRIML1Q8N9V2 468 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 FSIP1Q8NA03 581 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 IL17RCQ8NAC3 791 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 OR2I1PQ8NGU4 316 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 OR10T2Q8NGX3 314 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 RIN3Q8TB24 985 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PIP4K2CQ8TBX8 421 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SPATA18Q8TC71 538 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SPPL2BQ8TCT7 592 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 OXER1Q8TDS5 423 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SH3RF2Q8TEC5 729 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SETD7Q8WTS6 366 aaKnown RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 HMGB4Q8WW32 186 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 WASF1Q92558 559 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 FOXJ1Q92949 421 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 KCNB2Q92953 911 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF274Q96GC6 653 aaPredicted RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SENP8Q96LD8 212 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 CAMK1GQ96NX5 476 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 DCBLD2Q96PD2 775 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PNMA5Q96PV4 448 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 MTMR9Q96QG7 549 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TSPAN18Q96SJ8 248 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PNKPQ96T60 521 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 CDC6Q99741 560 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PI4K2AQ9BTU6 479 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ZDHHC5Q9C0B5 715 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ZCWPW1Q9H0M4 648 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 BHMT2Q9H2M3 363 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 LINC00597Q9H2U6 94 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 C17orf75Q9HAS0 396 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 POLD4Q9HCU8 107 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TRPC7Q9HCX4 862 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 KMT5AQ9NQR1 393 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ABI2Q9NYB9 513 aaPredicted RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ARHGAP28Q9P2N2 729 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 UXTQ9UBK9 157 aaPredicted RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TUBGCP4Q9UGJ1 667 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 KCNG1Q9UIX4 513 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PCOLCE2Q9UKZ9 415 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 MAGED2Q9UNF1 606 aaPredicted RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PCDHB5Q9Y5E4 795 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SNX14Q9Y5W7 946 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 WNT6Q9Y6F9 365 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 STK36Q9NRP7 1315 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 VWA8A3KMH1 1905 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ADAMTS20P59510 1910 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SPTBN1Q01082 2364 aaKnown RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 MYO9AB2RTY4 2548 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ABCA12Q86UK0 2595 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 A0A0A0MRY4 1105 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms