RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 GOLGA7BQ2TAP0 167 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 PPP1R26Q5T8A7 1209 aaPredicted RBP10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 TPGS2Q68CL5 300 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 LCLAT1Q6UWP7 414 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 RSPO2Q6UXX9 243 aaPredicted RBP10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 LRRTM3Q86VH5 581 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 TMTC1Q8IUR5 882 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 SPPL2BQ8TCT7 592 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 SLC2A14Q8TDB8 520 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 PPP2R3CQ969Q6 453 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 SMARCD1Q96GM5 515 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 PCED1BQ96HM7 432 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 FUBP3Q96I24 572 aaKnown RBP eCLIP10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 CCDC42Q96M95 316 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 PGLYRP2Q96PD5 576 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 KLHL5Q96PQ7 755 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 PKMYT1Q99640 499 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 HNRNPABQ99729 332 aaKnown RBP10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 LPIN3Q9BQK8 851 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 B3GNT5Q9BYG0 378 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 PLXNA4Q9HCM2 1894 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 ABCB6Q9NP58 842 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 ABI2Q9NYB9 513 aaPredicted RBP10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 TSPAN16Q9UKR8 245 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 MAFFQ9ULX9 164 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 PCDHGC3Q9UN70 934 aa10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.71□□□□□ -0.69
RN7SKP54-201ENST00000410704 SSU72P8A0A1W2PR75 194 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 WDR27A2RRH5 827 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 M0QYV0 167 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 CLDN5O00501 218 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 ADAM12O43184 909 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 AKR1B10O60218 316 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 LSM8O95777 96 aaKnown RBP10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 MMEP08473 750 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 SSTR3P32745 418 aaPredicted RBP10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 EIF4A3P38919 411 aaKnown RBP10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 ADCY1Q08828 1119 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 BST2Q10589 180 aaKnown RBP10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 MAPK8IP2Q13387 824 aaPredicted RBP10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 CFAP221Q4G0U5 840 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 ZNF697Q5TEC3 545 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 HGSNATQ68CP4 663 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 WDR59Q6PJI9 974 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 RNF19BQ6ZMZ0 732 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 ZNF571Q7Z3V5 609 aaPredicted RBP10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 FAM35AQ86V20 835 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 LRRC8AQ8IWT6 810 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 FUKQ8N0W3 1084 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 ANKRD52Q8NB46 1076 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 TMEM35BQ8NCS4 154 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 ZNF461Q8TAF7 563 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 SLC20A1Q8WUM9 679 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 DDX1Q92499 740 aaKnown RBP10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 MRPL38Q96DV4 380 aaKnown RBP10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 NOX5Q96PH1 765 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 CHP1Q99653 195 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 LHX5Q9H2C1 402 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 NHEJ1Q9H9Q4 299 aaPredicted RBP10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 KRT82Q9NSB4 513 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 TMLHEQ9NVH6 421 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 ARHGAP20Q9P2F6 1191 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 AFF4Q9UHB7 1163 aaKnown RBP10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 VWA8A3KMH1 1905 aa10.7□□□□□ -0.7
RN7SKP54-201ENST00000410704 MTMR11A4FU01 709 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 EPOPA6NHQ4 379 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 HIDE1A8MVS5 230 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 RFXAPO00287 272 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 PRRG1O14668 218 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 TRIM66O15016 1216 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 AP1G2O75843 785 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 ABLIM3O94929 683 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 IPO7O95373 1038 aaKnown RBP10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 GLUD1P00367 558 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 C1RP00736 705 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 PLEKP08567 350 aaPredicted RBP10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 SETSIPP0DME0 302 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 ATF2P15336 505 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 CHRNB2P17787 502 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 FECHP22830 423 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 BDNFP23560 247 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 IRS1P35568 1242 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 CYLC1P35663 651 aaPredicted RBP10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 GRIK1P39086 918 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 MAGEA11P43364 429 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 TUFMP49411 452 aaKnown RBP10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 SNX16P57768 344 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 RPL10AP62906 217 aaKnown RBP10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 FMO1Q01740 532 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 CAMK1Q14012 370 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 CCDC142Q17RM4 750 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 MGAT5BQ3V5L5 792 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 PPP1R2P3Q6NXS1 205 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 DENND1BQ6P3S1 775 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 ELMSAN1Q6PJG2 1045 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 VSTM1Q6UX27 236 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 PALB2Q86YC2 1186 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 PASD1Q8IV76 773 aa10.69□□□□□ -0.7
RN7SKP54-201ENST00000410704 CCDC170Q8IYT3 715 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms