RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ATP5HO75947 161 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 CLUP10909 449 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 PDGFRAP16234 1089 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 MIB1Q86YT6 1006 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 B3GALNT2Q8NCR0 500 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 RIN2Q8WYP3 895 aaPredicted RBP11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 PANX2Q96RD6 677 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 STK33Q9BYT3 514 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 STARD7Q9NQZ5 370 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 METTL5Q9NRN9 209 aaKnown RBP11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 EVA1BQ9NVM1 165 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 BARHL2Q9NY43 387 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 DYRK1BQ9Y463 629 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 PSMD14O00487 310 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 RTN2O75298 545 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 GTF2A2P52657 109 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 GUCY1A3Q02108 690 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 ACOX1Q15067 660 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 SLC25A24Q6NUK1 477 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 ENOSF1Q7L5Y1 443 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 SP8Q8IXZ3 490 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 HPS3Q969F9 1004 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 ZNF512BQ96KM6 892 aaPredicted RBP11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 PRPF18Q99633 342 aaKnown RBP11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 VTI1BQ9UEU0 232 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 HAUS5O94927 633 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 GATAD2AQ86YP4 633 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 HERC6Q8IVU3 1022 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 CLIP3Q96DZ5 547 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 MIEF1Q9NQG6 463 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 SYBUQ9NX95 663 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 NCKAP1Q9Y2A7 1128 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 MYO18AQ92614 2054 aaKnown RBP11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 GPR182O15218 404 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 CLK1P49759 484 aaKnown RBP11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 AP3M2P53677 418 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 BFSP2Q13515 415 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 ZNF284Q2VY69 593 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 MTSS1LQ765P7 747 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 TMC7Q7Z402 723 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 DPP10Q8N608 796 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 TEX13BQ9BXU2 312 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 MYH13Q9UKX3 1938 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 CRB1P82279 1406 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 IL18RAPO95256 599 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 VTNP04004 478 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 MTHFD1LQ6UB35 978 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 ARHGEF26Q96DR7 871 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 PIF1Q9H611 641 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 ZNF711Q9Y462 761 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 ARHGAP31Q2M1Z3 1444 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 LINC00854A0A1B0GVQ3 168 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 HLA-DQA2P01906 255 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 ITGB3P05106 788 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 CCR4P51679 360 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 FOXO4P98177 505 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 HLA-DQA1Q5Y7H0 255 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 TFB1MQ8WVM0 346 aaKnown RBP11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 SOHLH2Q9NX45 425 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 SMIM22K7EJ46 135 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 KRT16P08779 473 aa11.67□□□□□ -0.54
PRPF40A-202ENST00000410080 ANXA11P50995 505 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 MTFR1Q15390 333 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 NFIL3Q16649 462 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 LEMD2Q8NC56 503 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 FAM118BQ9BPY3 351 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 SHCBP1LQ9BZQ2 653 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 RCOR1Q9UKL0 485 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 TCP11X1B4DZS4 312 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 MFAP3LO75121 409 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 ZNF286BP0CG31 522 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 GRK4P32298 578 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 ST13P50502 369 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 NME5P56597 212 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 DOK6Q6PKX4 331 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 TRMT11Q7Z4G4 463 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 MS4A14Q96JA4 679 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 PPP1R2P1Q96PQ5 205 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 PHACTR1Q9C0D0 580 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 TMEM39BQ9GZU3 492 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 NCAPD2Q15021 1401 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 CCDC22O60826 627 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 SRP72O76094 671 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 RRM2P31350 389 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 TTLL9Q3SXZ7 439 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 CCDC92Q53HC0 331 aaPredicted RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 SH3BP5LQ7L8J4 393 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 PIK3R5Q8WYR1 880 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 USP13Q92995 863 aaPredicted RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 TRIM10Q9UDY6 481 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 GGT7Q9UJ14 662 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 MGAT4DA6NG13 374 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 CASTOR2A6NHX0 329 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 MAGEB2O15479 319 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 NMT1P30419 496 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 PRKCEQ02156 737 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 PCYOX1LQ8NBM8 494 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 FAM84BQ96KN1 310 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms