RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 GLP2RO95838 553 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 SCGB1D1O95968 90 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 GYS1P13807 737 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 BMP7P18075 431 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 HOXA5P20719 270 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 CCR9P51686 369 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 SLURP1P55000 103 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 ITGA1P56199 1179 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 STILQ15468 1287 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 VMACQ2NL98 169 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 ATPAF1Q5TC12 328 aaPredicted RBP5.51□□□□□ -1.53
LSM5-205ENST00000409952 KANK2Q63ZY3 851 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 SLC30A6Q6NXT4 461 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 NFRKBQ6P4R8 1299 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 KIAA0408Q6ZU52 694 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 KRT74Q7RTS7 529 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 CHD1LQ86WJ1 897 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 SP8Q8IXZ3 490 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 UNC5BQ8IZJ1 945 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 TMEM57Q8N5G2 664 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 NGEFQ8N5V2 710 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 KYQ8NBH2 561 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 CEP70Q8NHQ1 597 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 SCAMP5Q8TAC9 235 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 NSUN4Q96CB9 384 aaKnown RBP5.51□□□□□ -1.53
LSM5-205ENST00000409952 RADILQ96JH8 1075 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 SYT3Q9BQG1 590 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 SLF1Q9BQI6 1058 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 ARHGAP39Q9C0H5 1083 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 PCDHAC1Q9H158 963 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 TP63Q9H3D4 680 aaPredicted RBP5.51□□□□□ -1.53
LSM5-205ENST00000409952 PRDM13Q9H4Q3 707 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 LDAHQ9H6V9 325 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 MRGBPQ9NV56 204 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 TRPS1Q9UHF7 1281 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 MID2Q9UJV3 735 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 AJAP1Q9UKB5 411 aaPredicted RBP5.51□□□□□ -1.53
LSM5-205ENST00000409952 CA14Q9ULX7 337 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 A0A087WWL8 130 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 TMEM233B4DJY2 109 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 PTP4A3O75365 173 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 ANXA1P04083 346 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 GNAI3P08754 354 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 CNPP09543 421 aaKnown RBP5.5□□□□□ -1.53
LSM5-205ENST00000409952 GUCY1A2P33402 732 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 ACTN2P35609 894 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 ANTXR2P58335 489 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 GNAI1P63096 354 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 POU6F2P78424 691 aaPredicted RBP5.5□□□□□ -1.53
LSM5-205ENST00000409952 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.5□□□□□ -1.53
LSM5-205ENST00000409952 SCAPQ12770 1279 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 SLC5A9Q2M3M2 681 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 TMTC4Q5T4D3 741 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 DCAF12L1Q5VU92 463 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 ATG16L1Q676U5 607 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 TEPPQ6URK8 271 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 CRTC1Q6UUV9 634 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 TMTC3Q6ZXV5 915 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 ANKS1BQ7Z6G8 1248 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 ZC3H18Q86VM9 953 aaKnown RBP5.5□□□□□ -1.53
LSM5-205ENST00000409952 PROSER1Q86XN7 944 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 MPP5Q8N3R9 675 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 DNAJC5GQ8N7S2 189 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 CCDC191Q8NCU4 936 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 CREB3L4Q8TEY5 395 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 CASKIN2Q8WXE0 1202 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 RSC1A1Q92681 617 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 TRAPPC9Q96Q05 1148 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 TXLNGYQ9BZA5 131 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 NOD2Q9HC29 1040 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 SLAMF7Q9NQ25 335 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 LPAR3Q9UBY5 353 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 DNAI1Q9UI46 699 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 ZMYND8Q9ULU4 1186 aaPredicted RBP5.5□□□□□ -1.53
LSM5-205ENST00000409952 CNPY2Q9Y2B0 182 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 CYP46A1Q9Y6A2 500 aa5.5□□□□□ -1.53
LSM5-205ENST00000409952 RSF1Q96T23 1441 aaPredicted RBP5.49□□□□□ -1.53
LSM5-205ENST00000409952 A0A0G2JLL6 359 aaPredicted RBP5.49□□□□□ -1.53
LSM5-205ENST00000409952 ADCY6O43306 1168 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 RASSF9O75901 435 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 USP1O94782 785 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 CSF1P09603 554 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 GAAP10253 952 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 ACVR2AP27037 513 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 PCSK1P29120 753 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 CRHR1P34998 444 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 BCAT1P54687 386 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 ALDH18A1P54886 795 aaKnown RBP5.49□□□□□ -1.53
LSM5-205ENST00000409952 NOMO3P69849 1222 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 IL13RA1P78552 427 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 NSUN2Q08J23 767 aaKnown RBP eCLIP5.49□□□□□ -1.53
LSM5-205ENST00000409952 EIF4A2Q14240 407 aaKnown RBP5.49□□□□□ -1.53
LSM5-205ENST00000409952 ANKRD1Q15327 319 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.49□□□□□ -1.53
LSM5-205ENST00000409952 HECTD3Q5T447 861 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 KIAA1614Q5VZ46 1190 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 VASNQ6EMK4 673 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 CD300LDQ6UXZ3 194 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 RAB11FIP2Q7L804 512 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 TAS1R1Q7RTX1 841 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms