RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 MAGEC2Q9UBF1 373 aaPredicted RBP23.83■■□□□ 1.41
PTCD3-203ENST00000409783 CD58P19256 250 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 SP100P23497 879 aaPredicted RBP23.82■■□□□ 1.4
PTCD3-203ENST00000409783 EEF1GP26641 437 aaKnown RBP23.82■■□□□ 1.4
PTCD3-203ENST00000409783 EPHB3P54753 998 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 SLC5A9Q2M3M2 681 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 PABPC1LQ4VXU2 614 aaKnown RBP23.82■■□□□ 1.4
PTCD3-203ENST00000409783 PRSS36Q5K4E3 855 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 TMC8Q8IU68 726 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 GJD3Q8N144 294 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 PSMG2Q969U7 264 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 NT5C1BQ96P26 610 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 MYADMQ96S97 322 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 BPIFA3Q9BQP9 254 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 CORO1BQ9BR76 489 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 INTS2Q9H0H0 1204 aaKnown RBP23.82■■□□□ 1.4
PTCD3-203ENST00000409783 CISHQ9NSE2 258 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 TMEM30AQ9NV96 361 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 ASB3Q9Y575 518 aa23.82■■□□□ 1.4
PTCD3-203ENST00000409783 BDNFP23560 247 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 FSHRP23945 695 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 CCR2P41597 374 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 CYP27A1Q02318 531 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 VWA3BQ502W6 1294 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 POTEHQ6S545 545 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 DNAJB7Q7Z6W7 309 aaPredicted RBP23.81■■□□□ 1.4
PTCD3-203ENST00000409783 ARHGEF19Q8IW93 802 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 ELMOD1Q8N336 334 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 ITFG1Q8TB96 612 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 NT5C1AQ9BXI3 368 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 ZNF518BQ9C0D4 1074 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 NDST4Q9H3R1 872 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 NR2E1Q9Y466 385 aa23.81■■□□□ 1.4
PTCD3-203ENST00000409783 GTPBP10A4D1E9 387 aaKnown RBP23.8■■□□□ 1.4
PTCD3-203ENST00000409783 CLDN5O00501 218 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 MOSPD3O75425 235 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 ZNF18P17022 549 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 CACNA2D1P54289 1103 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 DDR2Q16832 855 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 SDHAF4Q5VUM1 108 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 IQCEQ6IPM2 695 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 PHLDB3Q6NSJ2 640 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 VSTM1Q6UX27 236 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 OTOP3Q7RTS5 596 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 FUKQ8N0W3 1084 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 TTC39CQ8N584 583 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 C12orf29Q8N999 325 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 GPR152Q8TDT2 470 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 GIPC2Q8TF65 315 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 KAT5Q92993 513 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 TCEAL4Q96EI5 215 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 CRACR2AQ9BSW2 395 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 ZNF334Q9HCZ1 680 aaPredicted RBP23.8■■□□□ 1.4
PTCD3-203ENST00000409783 GCNT4Q9P109 453 aa23.8■■□□□ 1.4
PTCD3-203ENST00000409783 MYO10Q9HD67 2058 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 DENND4CQ5VZ89 1909 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 BDP1A6H8Y1 2624 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 PRKCSHP14314 528 aaPredicted RBP23.79■■□□□ 1.4
PTCD3-203ENST00000409783 HMGA1P17096 107 aaKnown RBP23.79■■□□□ 1.4
PTCD3-203ENST00000409783 SLC9A1P19634 815 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 ACO1P21399 889 aaKnown RBP23.79■■□□□ 1.4
PTCD3-203ENST00000409783 TBXAS1P24557 533 aaPredicted RBP23.79■■□□□ 1.4
PTCD3-203ENST00000409783 RAD23BP54727 409 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 RPL10AP62906 217 aaKnown RBP23.79■■□□□ 1.4
PTCD3-203ENST00000409783 GCNT1Q02742 428 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 ZSCAN23Q3MJ62 389 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 DPY19L2P1Q6NXN4 242 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 GET4Q7L5D6 327 aaPredicted RBP23.79■■□□□ 1.4
PTCD3-203ENST00000409783 DHX40Q8IX18 779 aaKnown RBP23.79■■□□□ 1.4
PTCD3-203ENST00000409783 ZDHHC14Q8IZN3 488 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 AOPEPQ8N6M6 819 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 SLC4A11Q8NBS3 891 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 STKLD1Q8NE28 680 aa23.79■■□□□ 1.4
PTCD3-203ENST00000409783 CCDC130P13994 396 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 KRT31Q15323 416 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 TRIM65Q6PJ69 517 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 GBP6Q6ZN66 633 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 ITIH5Q86UX2 942 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 FAM35AQ86V20 835 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 SCN4BQ8IWT1 228 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 PPM1KQ8N3J5 372 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 TDRD5Q8NAT2 981 aaKnown RBP23.78■■□□□ 1.4
PTCD3-203ENST00000409783 LEMD2Q8NC56 503 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 KREMEN1Q96MU8 473 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 NAT10Q9H0A0 1025 aaKnown RBP23.78■■□□□ 1.4
PTCD3-203ENST00000409783 IL21Q9HBE4 155 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 ASAH2Q9NR71 780 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 TAB2Q9NYJ8 693 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.78■■□□□ 1.4
PTCD3-203ENST00000409783 EPS15L1Q9UBC2 864 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 OBSL1O75147 1896 aa23.78■■□□□ 1.4
PTCD3-203ENST00000409783 MICAL2O94851 1124 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 CEBPBP17676 345 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 PON1P27169 355 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 SSTR3P32745 418 aaPredicted RBP23.77■■□□□ 1.4
PTCD3-203ENST00000409783 APBA1Q02410 837 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 MTMR3Q13615 1198 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 VEPH1Q14D04 833 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 EXOC3L4Q17RC7 722 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 ZNF394Q53GI3 561 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms