RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 WBP1LQ9NX94 342 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 NKIRAS1Q9NYS0 192 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 STOML1Q9UBI4 398 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 HAO1Q9UJM8 370 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 C2CD2Q9Y426 696 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 PCDHB9Q9Y5E1 797 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 SNCAIPQ9Y6H5 919 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 LRRD1A4D1F6 860 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 MAGEA13PA6NCF6 341 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 CASQ2O14958 399 aaPredicted RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 THAP12O43422 761 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 FAM13AO94988 1023 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 STAU1O95793 577 aaKnown RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 GNAT1P11488 350 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 PLS3P13797 630 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 TARSP26639 723 aaKnown RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 MAGEA6P43360 314 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 HSD17B4P51659 736 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 SARNPP82979 210 aaKnown RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 DAB2P98082 770 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 CDK16Q00536 496 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 DYNC1I2Q13409 638 aaKnown RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 LSAMPQ13449 338 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 DSC3Q14574 896 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 MESDQ14696 234 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 KPNB1Q14974 876 aaKnown RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 COL19A1Q14993 1142 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 SETDB1Q15047 1291 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 PKN2Q16513 984 aaKnown RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 PLEKHG6Q3KR16 790 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 TEX44Q53QW1 395 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 THEMIS2Q5TEJ8 643 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 IZUMO3Q5VZ72 239 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 DSTYKQ6XUX3 929 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 OTUD6AQ7L8S5 288 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 NET1Q7Z628 596 aaPredicted RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 ADAT2Q7Z6V5 191 aaKnown RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 NBPF5PQ86XG9 351 aaPredicted RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 CLEC10AQ8IUN9 316 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 MAP4K3Q8IVH8 894 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 ARHGAP18Q8N392 663 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 ZNF784Q8NCA9 323 aaPredicted RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 RAB3IL1Q8TBN0 382 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 UCMAQ8WVF2 138 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 C1orf54Q8WWF1 131 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 STON2Q8WXE9 905 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 APBB2Q92870 758 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 KAT5Q92993 513 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 ALKBH8Q96BT7 664 aaKnown RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 DYDC2Q96IM9 177 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 ZDHHC15Q96MV8 337 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 ACCSQ96QU6 501 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 TSC22D3Q99576 134 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 RBCK1Q9BYM8 510 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 WDR11Q9BZH6 1224 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 RANBP17Q9H2T7 1088 aaKnown RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 UNC45AQ9H3U1 944 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 ACSS3Q9H6R3 686 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 TMEM8AQ9HCN3 771 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 ARL8BQ9NVJ2 186 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 HSPBP1Q9NZL4 362 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 RGL1Q9NZL6 768 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 PSMC3IPQ9P2W1 217 aaPredicted RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 POLLQ9UGP5 575 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 GGT7Q9UJ14 662 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 PHF24Q9UPV7 400 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 STYXL1Q9Y6J8 313 aa3.31□□□□□ -1.88
CUL3-204ENST00000409777 COL4A4P53420 1690 aaPredicted RBP3.31□□□□□ -1.88
CUL3-204ENST00000409777 DENND3A2RUS2 1198 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 RASA4BC9J798 803 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 RASA4O43374 803 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 TBX10O75333 385 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 ENTPD5O75356 428 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 BBOX1O75936 387 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 PABPC4LP0CB38 370 aaKnown RBP3.3□□□□□ -1.88
CUL3-204ENST00000409777 EEF2P13639 858 aaKnown RBP3.3□□□□□ -1.88
CUL3-204ENST00000409777 CDC25CP30307 473 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 L1CAMP32004 1257 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 CDH5P33151 784 aaPredicted RBP3.3□□□□□ -1.88
CUL3-204ENST00000409777 SLC16A2P36021 539 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 CPOXP36551 454 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 MFAP3P55082 362 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 RTP1P59025 263 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 CNTN2Q02246 1040 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 MAP3K10Q02779 954 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 ZNF252P-AS1Q0IIN9 211 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 TBCCQ15814 346 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 SLC4A8Q2Y0W8 1093 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 TAF1BQ53T94 588 aaPredicted RBP3.3□□□□□ -1.88
CUL3-204ENST00000409777 TJAP1Q5JTD0 557 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 TCERG1LQ5VWI1 586 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 SNX30Q5VWJ9 437 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 PCNX4Q63HM2 1172 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 CDC42EP5Q6NZY7 148 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 SLC39A4Q6P5W5 647 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 AAGABQ6PD74 315 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 TRIM72Q6ZMU5 477 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 LRRC74BQ6ZQY2 392 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 KCTD1Q719H9 257 aa3.3□□□□□ -1.88
CUL3-204ENST00000409777 PRUNE1Q86TP1 453 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms