RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 QRICH2Q9H0J4 1663 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 METP08581 1390 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 LRPPRCP42704 1394 aaKnown RBP5.46□□□□□ -1.54
CLK1-203ENST00000409769 CD1AP06126 327 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 SLC6A2P23975 617 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 HSD11B2P80365 405 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 CYP2A13Q16696 494 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 IFIT1BQ5T764 474 aaKnown RBP5.46□□□□□ -1.54
CLK1-203ENST00000409769 ZNF365Q70YC5 407 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 FAM90A1Q86YD7 464 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 PDSS2Q86YH6 399 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 RAVER1Q8IY67 606 aaKnown RBP5.46□□□□□ -1.54
CLK1-203ENST00000409769 TCEAL8Q8IYN2 117 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 JDP2Q8WYK2 163 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 RAB24Q969Q5 203 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 PTCD3Q96EY7 689 aaKnown RBP5.46□□□□□ -1.54
CLK1-203ENST00000409769 PUS7Q96PZ0 661 aaKnown RBP5.46□□□□□ -1.54
CLK1-203ENST00000409769 PNKPQ96T60 521 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 AIFM2Q9BRQ8 373 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 GSTO2Q9H4Y5 243 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 GNL3LQ9NVN8 582 aaKnown RBP5.46□□□□□ -1.54
CLK1-203ENST00000409769 KCTD5Q9NXV2 234 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 PTPRUQ92729 1446 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 NWD1Q149M9 1564 aa5.46□□□□□ -1.54
CLK1-203ENST00000409769 ABCC11Q96J66 1382 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 PIK3R4Q99570 1358 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 CCDC151A5D8V7 595 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 H3BML4 177 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 F2RL2O00254 374 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 KIAA0391O15091 583 aaKnown RBP5.45□□□□□ -1.54
CLK1-203ENST00000409769 SBK3P0C264 359 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 PRDX5P30044 214 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 MAP2K6P52564 334 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 SLFN5Q08AF3 891 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 PPP2R5AQ15172 486 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 EPM2AIP1Q7L775 607 aaPredicted RBP5.45□□□□□ -1.54
CLK1-203ENST00000409769 ARHGEF25Q86VW2 580 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 CHPFQ8IZ52 775 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 SLC35G2Q8TBE7 412 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 DIS3LQ8TF46 1054 aaKnown RBP5.45□□□□□ -1.54
CLK1-203ENST00000409769 ZNF384Q8TF68 577 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 TESK2Q96S53 571 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 VRK1Q99986 396 aaPredicted RBP5.45□□□□□ -1.54
CLK1-203ENST00000409769 PACSIN1Q9BY11 444 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 UNKLQ9H9P5 680 aaKnown RBP5.45□□□□□ -1.54
CLK1-203ENST00000409769 NPHP4O75161 1426 aaPredicted RBP5.45□□□□□ -1.54
CLK1-203ENST00000409769 SALL3Q9BXA9 1300 aa5.45□□□□□ -1.54
CLK1-203ENST00000409769 STRCP1A6NGW2 1772 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 EIF3AQ14152 1382 aaKnown RBP5.44□□□□□ -1.54
CLK1-203ENST00000409769 RBMXL2O75526 392 aaKnown RBP5.44□□□□□ -1.54
CLK1-203ENST00000409769 PRSS23O95084 383 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 MATN4O95460 622 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 FTLP02792 175 aaPredicted RBP5.44□□□□□ -1.54
CLK1-203ENST00000409769 SMARCA1P28370 1054 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 NKX6-1P78426 367 aaPredicted RBP5.44□□□□□ -1.54
CLK1-203ENST00000409769 FOXF2Q12947 444 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 PTCH1Q13635 1447 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 FLYWCH1Q4VC44 716 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 HEATR3Q7Z4Q2 680 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 GRASPQ7Z6J2 395 aaPredicted RBP5.44□□□□□ -1.54
CLK1-203ENST00000409769 TPH2Q8IWU9 490 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 SRRM1Q8IYB3 904 aaKnown RBP5.44□□□□□ -1.54
CLK1-203ENST00000409769 CDK5RAP3Q96JB5 506 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 TAAR9Q96RI9 348 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 TCEAL9Q9UHQ7 104 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 ZDHHC8Q9ULC8 765 aa5.44□□□□□ -1.54
CLK1-203ENST00000409769 MYOM1P52179 1685 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 TULP4Q9NRJ4 1543 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.43□□□□□ -1.54
CLK1-203ENST00000409769 ADGRB2O60241 1585 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 FAM135BQ49AJ0 1406 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 CDHR4A6H8M9 788 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 PPM1GO15355 546 aaPredicted RBP5.43□□□□□ -1.54
CLK1-203ENST00000409769 TSPAN6O43657 245 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 AP1G1O43747 822 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 PEX1O43933 1283 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 SCGB1D2O95969 90 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 TYRP14679 529 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 NOMO3P69849 1222 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 TCF15Q12870 199 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 NOMO2Q5JPE7 1267 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 EMC10Q5UCC4 262 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 SP5Q6BEB4 398 aaPredicted RBP5.43□□□□□ -1.54
CLK1-203ENST00000409769 PTF1AQ7RTS3 328 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 AOPEPQ8N6M6 819 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 MAGEB6Q8N7X4 407 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 Q8NA96 180 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 ANKS1AQ92625 1134 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 NACC2Q96BF6 587 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 RUNDC1Q96C34 613 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 UROC1Q96N76 676 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 GPR35Q9HC97 309 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 LMBRD1Q9NUN5 540 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 CFAP97Q9P2B7 532 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 STXBP5LQ9Y2K9 1186 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 PCDHA3Q9Y5H8 950 aa5.43□□□□□ -1.54
CLK1-203ENST00000409769 CCDC7Q96M83 1385 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 DISP3Q9P2K9 1392 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 TRGV11A0A075B6L2 103 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 LRRC14BA6NHZ5 514 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms