RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 GTSE1Q9NYZ3 720 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 SMG5Q9UPR3 1016 aaKnown RBP15.8■□□□□ 0.12
CBX3-203ENST00000409747 OBSL1O75147 1896 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 NOL4O94818 638 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 CYP2F1P24903 491 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 MAGEA11P43364 429 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 SOX9P48436 509 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 GPR15P49685 360 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 ZNF268Q14587 947 aaPredicted RBP15.8■□□□□ 0.12
CBX3-203ENST00000409747 DDR2Q16832 855 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 FOXD4L6Q3SYB3 417 aaPredicted RBP15.8■□□□□ 0.12
CBX3-203ENST00000409747 FOXD4L3Q6VB84 417 aaPredicted RBP15.8■□□□□ 0.12
CBX3-203ENST00000409747 MON1AQ86VX9 555 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 OSTM1Q86WC4 334 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 KIAA2013Q8IYS2 634 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 SYNPOQ8N3V7 929 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 GPR161Q8N6U8 529 aaKnown RBP15.8■□□□□ 0.12
CBX3-203ENST00000409747 XXYLT1Q8NBI6 393 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 FAM84AQ96KN4 292 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 MYRFLQ96LU7 910 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 CEP295NLQ96MC4 621 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 TDP1Q9NUW8 608 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 CDH9Q9ULB4 789 aa15.8■□□□□ 0.12
CBX3-203ENST00000409747 EP300Q09472 2414 aaPredicted RBP15.79■□□□□ 0.12
CBX3-203ENST00000409747 PVALEFA0A1B0GWK0 134 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 TGFB1I1O43294 461 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 DLATP10515 647 aaKnown RBP15.79■□□□□ 0.12
CBX3-203ENST00000409747 TDGF1P13385 188 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 TNNI1P19237 187 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 AMPD2Q01433 879 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 EHHADHQ08426 723 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 PSMD6Q15008 389 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 RESP18Q5W5W9 173 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 CC2D1AQ6P1N0 951 aaPredicted RBP15.79■□□□□ 0.12
CBX3-203ENST00000409747 FAM171BQ6P995 826 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 TRAPPC11Q7Z392 1133 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 LIMS2Q7Z4I7 341 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 CEP57L1Q8IYX8 460 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 FSIP1Q8NA03 581 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 SCFD1Q8WVM8 642 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 CGRRF1Q99675 332 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 SYT15Q9BQS2 421 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 SMG9Q9H0W8 520 aaKnown RBP15.79■□□□□ 0.12
CBX3-203ENST00000409747 PCDHA7Q9UN72 937 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 DCHS1Q96JQ0 3298 aa15.79■□□□□ 0.12
CBX3-203ENST00000409747 OTOGLQ3ZCN5 2332 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 PAPSS2O95340 614 aaPredicted RBP15.78■□□□□ 0.12
CBX3-203ENST00000409747 WARSP23381 471 aaKnown RBP15.78■□□□□ 0.12
CBX3-203ENST00000409747 CYP2J2P51589 502 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 BMT2Q1RMZ1 405 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 TXNDC8Q6A555 127 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 TXNDC11Q6PKC3 985 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 VSTM1Q6UX27 236 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 SCN4BQ8IWT1 228 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 NELFCDQ8IXH7 590 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 C12orf56Q8IXR9 622 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 RDH13Q8NBN7 331 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 TTC8Q8TAM2 541 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 GOLGA5Q8TBA6 731 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 KBTBD7Q8WVZ9 684 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 USP13Q92995 863 aaPredicted RBP15.78■□□□□ 0.12
CBX3-203ENST00000409747 EXOC4Q96A65 974 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 MMS19Q96T76 1030 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 EHD2Q9NZN4 543 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 MAGEC2Q9UBF1 373 aaPredicted RBP15.78■□□□□ 0.12
CBX3-203ENST00000409747 RAB23Q9ULC3 237 aa15.78■□□□□ 0.12
CBX3-203ENST00000409747 ZNF638Q14966 1978 aaKnown RBP15.78■□□□□ 0.12
CBX3-203ENST00000409747 TRAV19A0A0A6YYK7 116 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 PDE6CP51160 858 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 TNK2Q07912 1038 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 CYP24A1Q07973 514 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 RUNX3Q13761 415 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 PON2Q15165 354 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 SDHAF4Q5VUM1 108 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 FAM83CQ9BQN1 747 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 BLZF1Q9H2G9 400 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 GKN1Q9NS71 199 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 RBM12Q9NTZ6 932 aaKnown RBP15.77■□□□□ 0.12
CBX3-203ENST00000409747 GMEB2Q9UKD1 530 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 CCL26Q9Y258 94 aa15.77■□□□□ 0.12
CBX3-203ENST00000409747 CLIC2O15247 247 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 FAM163BP0C2L3 166 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 USP17L7P0C7H9 530 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 ANXA13P27216 316 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 PSMC1P62191 440 aaKnown RBP15.77■□□□□ 0.11
CBX3-203ENST00000409747 TNNC1P63316 161 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 SATB1Q01826 763 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 FAM160A1Q05DH4 1040 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 CCINQ13939 588 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 PDGFRLQ15198 375 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 KNOP1Q1ED39 458 aaKnown RBP15.77■□□□□ 0.11
CBX3-203ENST00000409747 SCARA3Q6AZY7 606 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 DCLK2Q8N568 766 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 STKLD1Q8NE28 680 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 MYLPFQ96A32 169 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 CCDC127Q96BQ5 260 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 SPATA17Q96L03 361 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 SNX25Q9H3E2 840 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 TRPC7Q9HCX4 862 aa15.77■□□□□ 0.11
CBX3-203ENST00000409747 TRIM66O15016 1216 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms