RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 CTNNB1P35222 781 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 NBPF12Q5TAG4 269 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 MROH9Q5TGP6 573 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 MMGT1Q8N4V1 131 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 TMEM245Q9H330 911 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 TUBE1Q9UJT0 475 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 TCOF1Q13428 1488 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 C19orf81C9J6K1 198 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 KRT8P05787 483 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 AMD1P17707 334 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 PLOD1Q02809 727 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 GRIN3AQ8TCU5 1115 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 AGPAT1Q99943 283 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 EHD2Q9NZN4 543 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 AMACRQ9UHK6 382 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 MRFAP1Q9Y605 127 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 C2orf81A6NN90 581 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 CD2BP2O95400 341 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 UMPSP11172 480 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 LONRF1Q17RB8 773 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 RESP18Q5W5W9 173 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 ST13P4Q8IZP2 240 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 RBBP8NLQ8NC74 664 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 ZSWIM2Q8NEG5 633 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 ZSCAN18Q8TBC5 510 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 ABCB6Q9NP58 842 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 AASDHPPTQ9NRN7 309 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 SNTG2Q9NY99 539 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 PFASO15067 1338 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 STX7O15400 261 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 GRM4Q14833 912 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 THUMPD3Q9BV44 507 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 PARD6BQ9BYG5 372 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 TLR8Q9NR97 1041 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 ZC3H7BQ9UGR2 993 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 LRRC14BA6NHZ5 514 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 ICE2Q659A1 982 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 FAM71DQ8N9W8 422 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 NT5MQ9NPB1 228 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 DAGLAQ9Y4D2 1042 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 MYO1CO00159 1063 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 KPNA3O00505 521 aaPredicted RBP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 KLK7P49862 253 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 FAM135BQ49AJ0 1406 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 RNF103O00237 685 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 TBC1D4O60343 1298 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 CLASP2O75122 1294 aaKnown RBP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 NR3C2P08235 984 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 SERPINB3P29508 390 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 ZNF445P59923 1031 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 LAMC2Q13753 1193 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 ADAM32Q8TC27 787 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 PIK3R5Q8WYR1 880 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 POP1Q99575 1024 aaKnown RBP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 OSBPL6Q9BZF3 934 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 CHGBP05060 677 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 SLC35G2Q8TBE7 412 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 KLHL25Q9H0H3 589 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 ZNHIT2Q9UHR6 403 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 NR2E3Q9Y5X4 410 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 THP07101 528 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 PNMA6AP0CW24 399 aaPredicted RBP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 NOS3P29474 1203 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 PLA2G4AP47712 749 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 KYAT1Q16773 422 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 XKR3Q5GH77 459 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 C4orf33Q8N1A6 199 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 ZNF304Q9HCX3 659 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 HMX1Q9NP08 348 aaPredicted RBP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 RUVBL2Q9Y230 463 aaKnown RBP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 TSC22D2O75157 780 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 ARFIP2P53365 341 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 CNTN1Q12860 1018 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 TAF13Q15543 124 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 ADGRF2Q8IZF7 708 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 MRFAP1L1Q96HT8 127 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 EPN3Q9H201 632 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 RNPEPQ9H4A4 650 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 LNPEPQ9UIQ6 1025 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 USP20Q9Y2K6 914 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 AMHP03971 560 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 RHOCP08134 193 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 ACAT1P24752 427 aaKnown RBP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 HALP42357 657 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 EIF2B5Q13144 721 aaKnown RBP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 BOP1Q14137 746 aaKnown RBP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 HLA-DQA1Q5Y7H0 255 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 TRIM65Q6PJ69 517 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 R3HCC1LQ7Z5L2 792 aaKnown RBP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 VPS37AQ8NEZ2 397 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 EMILIN2Q9BXX0 1053 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.74□□□□□ -1.01
SCN9A-203ENST00000409672 E9PBE3 544 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 RGS5O15539 181 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 KCNT1Q5JUK3 1230 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 KLHL24Q6TFL4 600 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 TUBGCP3Q96CW5 907 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 ASCC2Q9H1I8 757 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms