RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 SLC46A2Q9BY10 475 aa9.89□□□□□ -0.83
NIF3L1-203ENST00000409129 IKZF4Q9H2S9 585 aa9.89□□□□□ -0.83
NIF3L1-203ENST00000409129 IL21Q9HBE4 155 aa9.89□□□□□ -0.83
NIF3L1-203ENST00000409129 THG1LQ9NWX6 298 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-203ENST00000409129 FREM2Q5SZK8 3169 aa9.89□□□□□ -0.83
NIF3L1-203ENST00000409129 KPNA7A9QM74 516 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 K7ESF4 209 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 TAF4O00268 1085 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 IL18RAPO95256 599 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 PRAMEF12O95522 483 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 TNK2Q07912 1038 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 PON2Q15165 354 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 PTPAQ15257 358 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 ITPRIPL2Q3MIP1 535 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 SV2CQ496J9 727 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 ARSIQ5FYB1 569 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 STPG1Q5TH74 334 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 Q6ZS52 159 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 USP49Q70CQ1 688 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 LONP2Q86WA8 852 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 SFR1Q86XK3 245 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 NT5DC4Q86YG4 428 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 EFCAB13Q8IY85 973 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 CMTM8Q8IZV2 173 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 SYNPOQ8N3V7 929 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 GCNAQ96QF7 691 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 STRA6Q9BX79 667 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 SMG9Q9H0W8 520 aaKnown RBP9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 UPF2Q9HAU5 1272 aaKnown RBP9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 GKN1Q9NS71 199 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 C2orf42Q9NWW7 574 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 ABI2Q9NYB9 513 aaPredicted RBP9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 STK17AQ9UEE5 414 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 CCDC39Q9UFE4 941 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 ZMYM5Q9UJ78 669 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 WASF3Q9UPY6 502 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 PCDHB5Q9Y5E4 795 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 CLIC4Q9Y696 253 aa9.88□□□□□ -0.83
NIF3L1-203ENST00000409129 THADAQ6YHU6 1953 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 SHROOM3Q8TF72 1996 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 CELSR3Q9NYQ7 3312 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 PCNX2A6NKB5 2137 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 AXIN1O15169 862 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 F11P03951 625 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 HMGA1P17096 107 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 GAP43P17677 238 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 HOXA6P31267 233 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 PNPLA4P41247 253 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 LIMK1P53667 647 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 NLRP12P59046 1061 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 KCNA1Q09470 495 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 CCINQ13939 588 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 L1TD1Q5T7N2 865 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 RRAGBQ5VZM2 374 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 TCEAL6Q6IPX3 200 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 SV2BQ7L1I2 683 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 TMEM150AQ86TG1 271 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 ABCA7Q8IZY2 2146 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 MAB21L3Q8N8X9 362 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 ZCCHC14Q8WYQ9 949 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 GATA6Q92908 595 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 TCEAL3Q969E4 200 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 DNAJC19Q96DA6 116 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 ZNF560Q96MR9 790 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 ACCSQ96QU6 501 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 FAM83CQ9BQN1 747 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 FAM213AQ9BRX8 229 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 ADAM33Q9BZ11 813 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 ARRDC1-AS1Q9H2J1 176 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 MRPL44Q9H9J2 332 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 TMLHEQ9NVH6 421 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 SEL1LQ9UBV2 794 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 FBXO2Q9UK22 296 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 EXOC7Q9UPT5 735 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 SRPRBQ9Y5M8 271 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 ADAMTS9Q9P2N4 1935 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 MYO16Q9Y6X6 1858 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 CACNA1EQ15878 2313 aa9.87□□□□□ -0.83
NIF3L1-203ENST00000409129 VPS37CA5D8V6 355 aaPredicted RBP9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 MYMKA6NI61 221 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 PRPF40AO75400 957 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 LDHAP00338 332 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 CSH1P0DML2 217 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 CSH2P0DML3 217 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 DDX6P26196 483 aaKnown RBP eCLIP9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 AVPR1AP37288 418 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 WNT7BP56706 349 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 TFAMQ00059 246 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 TSPY1Q01534 308 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 ZNF252P-AS1Q0IIN9 211 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 RUNX3Q13761 415 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 NFE2Q16621 373 aaPredicted RBP9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 SOWAHCQ53LP3 525 aaPredicted RBP9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 WDR5BQ86VZ2 330 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 PDCL2Q8N4E4 241 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 C12orf50Q8NA57 414 aaPredicted RBP9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 ZSWIM2Q8NEG5 633 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 CACTINQ8WUQ7 758 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 USP13Q92995 863 aaPredicted RBP9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 CLIC6Q96NY7 704 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms