RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 SPOCD1Q6ZMY3 1216 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 PRPF39Q86UA1 669 aaKnown RBP8.73□□□□□ -1.01
SNX13-201ENST00000409076 TEKT4Q8WW24 435 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ATP6V0A1Q93050 837 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 SGF29Q96ES7 293 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 MAGEB18Q96M61 343 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 PDCD2LQ9BRP1 358 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 UBP1Q9NZI7 540 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 DIS3Q9Y2L1 958 aaKnown RBP8.73□□□□□ -1.01
SNX13-201ENST00000409076 BCORQ6W2J9 1755 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 DCCP43146 1447 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 GTPBP10A4D1E9 387 aaKnown RBP8.72□□□□□ -1.01
SNX13-201ENST00000409076 NVLO15381 856 aaKnown RBP8.72□□□□□ -1.01
SNX13-201ENST00000409076 MAP3K13O43283 966 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 CREB3O43889 395 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 SORBS2O94875 1100 aaKnown RBP8.72□□□□□ -1.01
SNX13-201ENST00000409076 ATXN1P54253 815 aaKnown RBP8.72□□□□□ -1.01
SNX13-201ENST00000409076 SLC25A3Q00325 362 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 STAT4Q14765 748 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 CCNJLQ8IV13 435 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 FBXO27Q8NI29 283 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 ADAM32Q8TC27 787 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 COPS5Q92905 334 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 ERLEC1Q96DZ1 483 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 PHF12Q96QT6 1004 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 DHX35Q9H5Z1 703 aaKnown RBP8.72□□□□□ -1.01
SNX13-201ENST00000409076 PSMC3IPQ9P2W1 217 aaPredicted RBP8.72□□□□□ -1.01
SNX13-201ENST00000409076 ZNF541Q9H0D2 1346 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 CXCL8P10145 99 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 FGFR1P11362 822 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 LCP1P13796 627 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 AMPD1P23109 780 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 PHBP35232 272 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 AQP5P55064 265 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 PLCB4Q15147 1175 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 MTFR1Q15390 333 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 LY6KQ17RY6 165 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 VWA5B1Q5TIE3 1220 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 SNX30Q5VWJ9 437 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 AP1ARQ63HQ0 302 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 NUDCD3Q8IVD9 361 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 NDUFAF2Q8N183 169 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 LRRC43Q8N309 656 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 C12orf29Q8N999 325 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 DEPDC1BQ8WUY9 529 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 CNKSR2Q8WXI2 1034 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 DDX27Q96GQ7 796 aaKnown RBP8.72□□□□□ -1.01
SNX13-201ENST00000409076 C17orf75Q9HAS0 396 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 CISHQ9NSE2 258 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 AKT3Q9Y243 479 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 TMX2Q9Y320 296 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 PIK3CDO00329 1044 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 HCRTO43612 131 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 UNC5CO95185 931 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 SLC4A1P02730 911 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 ASNSP08243 561 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 GM2AP17900 193 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 GNL1P36915 607 aaPredicted RBP8.72□□□□□ -1.01
SNX13-201ENST00000409076 BAG6P46379 1132 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 FOXD4Q12950 439 aaPredicted RBP8.72□□□□□ -1.01
SNX13-201ENST00000409076 SEMA3FQ13275 785 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 TMEM192Q8IY95 271 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 GALNT4Q8N4A0 578 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 RNF169Q8NCN4 708 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 WDR60Q8WVS4 1066 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 SCG3Q8WXD2 468 aaKnown RBP8.72□□□□□ -1.01
SNX13-201ENST00000409076 GMCL1Q96IK5 515 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 CLMNQ96JQ2 1002 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 ANLNQ9NQW6 1124 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 PARVAQ9NVD7 372 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 SLC12A4Q9UP95 1085 aa8.72□□□□□ -1.01
SNX13-201ENST00000409076 MYOCOSA0A1B0GUC4 107 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 PEX1O43933 1283 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 DCTN3O75935 186 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 ARL1P40616 181 aaPredicted RBP8.71□□□□□ -1.01
SNX13-201ENST00000409076 GLRBP48167 497 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 BNIP1Q12981 228 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 SIX1Q15475 284 aaPredicted RBP8.71□□□□□ -1.01
SNX13-201ENST00000409076 VPS72Q15906 364 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 HADHQ16836 314 aaKnown RBP8.71□□□□□ -1.01
SNX13-201ENST00000409076 ZC3H12AQ5D1E8 599 aaKnown RBP8.71□□□□□ -1.01
SNX13-201ENST00000409076 RNF135Q8IUD6 432 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 TMEM35BQ8NCS4 154 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 USP33Q8TEY7 942 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 PSPC1Q8WXF1 523 aaKnown RBP8.71□□□□□ -1.01
SNX13-201ENST00000409076 P3H4Q92791 437 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 EXT2Q93063 718 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 ABTB1Q969K4 478 aaPredicted RBP8.71□□□□□ -1.01
SNX13-201ENST00000409076 FAM81BQ96LP2 452 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 NMUR2Q9GZQ4 415 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 ZNF302Q9NR11 478 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 CYP26B1Q9NR63 512 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 DMAC2Q9NW81 257 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 WHRNQ9P202 907 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 HMGXB4Q9UGU5 601 aa8.71□□□□□ -1.01
SNX13-201ENST00000409076 C5orf60A6NFR6 353 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 SPDYE2BA6NHP3 402 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 FSCN2O14926 492 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 ATP9BO43861 1147 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 PSAPP07602 524 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms