RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MAD2L2Q9UI95 211 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 NFIBO00712 420 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 PDGFRAP16234 1089 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 MIIPQ5JXC2 388 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 TMC5Q6UXY8 1006 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 EGFL6Q8IUX8 553 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 THAP1Q9NVV9 213 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 NSMCE4AQ9NXX6 385 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 COPG2Q9UBF2 871 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 RNF225M0QZC1 329 aaPredicted RBP18.38■□□□□ 0.53
SMPD4-202ENST00000409031 C2CD2LO14523 706 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 GYS1P13807 737 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 ANPEPP15144 967 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 NCKAP1LP55160 1127 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 PTK2BQ14289 1009 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 SLC27A3Q5K4L6 730 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 RNF220Q5VTB9 566 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 KRT35Q92764 455 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 RRN3Q9NYV6 651 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 UBAP1LF5GYI3 381 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 LARGE2Q8N3Y3 721 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 BAP1Q92560 729 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 SLCO1B7G3V0H7 640 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 TPST1O60507 370 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 CCNJLQ8IV13 435 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 OR6B3Q8NGW1 331 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 DDX50Q9BQ39 737 aaKnown RBP18.37■□□□□ 0.53
SMPD4-202ENST00000409031 GRIN2DO15399 1336 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 FAM205AQ6ZU69 1335 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 C1orf232A0A0U1RR37 186 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 PPARGP37231 505 aaPredicted RBP18.37■□□□□ 0.53
SMPD4-202ENST00000409031 EPC2Q52LR7 807 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 LMBRD2Q68DH5 695 aaPredicted RBP18.37■□□□□ 0.53
SMPD4-202ENST00000409031 RABGEF1Q9UJ41 708 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 USP32Q8NFA0 1604 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 GH2P01242 217 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 RALBP11234 206 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 XIAPP98170 497 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 SKA2Q8WVK7 121 aaPredicted RBP18.37■□□□□ 0.53
SMPD4-202ENST00000409031 PAEPP09466 180 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 RASA1P20936 1047 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 LAYNQ6UX15 382 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 ZNF554Q86TJ5 538 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 CNKSR1Q969H4 720 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 DNAJC18Q9H819 358 aa18.37■□□□□ 0.53
SMPD4-202ENST00000409031 PGM3O95394 542 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 DHDDSQ86SQ9 333 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 ZCCHC9Q8N567 271 aaKnown RBP18.36■□□□□ 0.53
SMPD4-202ENST00000409031 PYDC1Q8WXC3 89 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 ARHGEF1Q92888 912 aaKnown RBP18.36■□□□□ 0.53
SMPD4-202ENST00000409031 AK5Q9Y6K8 562 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 FRMPD1Q5SYB0 1578 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 ERCC6L2Q5T890 1561 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 H0YIN7 160 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 RUNX1T1Q06455 604 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 GIT2Q14161 759 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 SLC5A9Q2M3M2 681 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 ZCCHC7Q8N3Z6 543 aaKnown RBP18.36■□□□□ 0.53
SMPD4-202ENST00000409031 CELF1Q92879 486 aaKnown RBP18.36■□□□□ 0.53
SMPD4-202ENST00000409031 PAWRQ96IZ0 340 aaKnown RBP18.36■□□□□ 0.53
SMPD4-202ENST00000409031 HLA-DRAP01903 254 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 MMP14P50281 582 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 LIN52Q52LA3 116 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 SEL1L3Q68CR1 1132 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 TTC27Q6P3X3 843 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 AAGABQ6PD74 315 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 NANOGNBQ7Z5D8 188 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.36■□□□□ 0.533e-8■□□□□ 9.5
SMPD4-202ENST00000409031 PPME1Q9Y570 386 aa18.36■□□□□ 0.53
SMPD4-202ENST00000409031 YWHABP31946 246 aaKnown RBP18.35■□□□□ 0.53
SMPD4-202ENST00000409031 STKLD1Q8NE28 680 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 SLC20A1Q8WUM9 679 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 NAT9Q9BTE0 207 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 RRM1P23921 792 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 MYBPC2Q14324 1141 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 EFHC2Q5JST6 749 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 TCHHL1Q5QJ38 904 aaPredicted RBP18.35■□□□□ 0.53
SMPD4-202ENST00000409031 KRT27Q7Z3Y8 459 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 CCDC33Q8N5R6 958 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 COA1Q9GZY4 146 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 EPS8L2Q9H6S3 715 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 CD209Q9NNX6 404 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 SH3GLB1Q9Y371 365 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 HECW2Q9P2P5 1572 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 RPA3P35244 121 aaPredicted RBP18.35■□□□□ 0.53
SMPD4-202ENST00000409031 NCOA4Q13772 614 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 MAGED4Q96JG8 741 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 MRPS26Q9BYN8 205 aaKnown RBP18.35■□□□□ 0.53
SMPD4-202ENST00000409031 CAB39Q9Y376 341 aaPredicted RBP18.35■□□□□ 0.53
SMPD4-202ENST00000409031 C5orf60A6NFR6 353 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 DMPKQ09013 629 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 DLG3Q92796 817 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 FAR2Q96K12 515 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 RMDN3Q96TC7 470 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 SH3GL1Q99961 368 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 ZMYND8Q9ULU4 1186 aaPredicted RBP18.35■□□□□ 0.53
SMPD4-202ENST00000409031 IVNS1ABPQ9Y6Y0 642 aa18.35■□□□□ 0.53
SMPD4-202ENST00000409031 EPHB6O15197 1021 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 ABHD2P08910 425 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 MFSD5Q6N075 450 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms