RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NOL4O94818 638 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 NR3C1P04150 777 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 ACAT1P24752 427 aaKnown RBP9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 GNL1P36915 607 aaPredicted RBP9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 VIPR2P41587 438 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 PPP3CCP48454 512 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 KPNA1P52294 538 aaPredicted RBP9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 NLRP12P59046 1061 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 ENPEPQ07075 957 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 ZNF268Q14587 947 aaPredicted RBP9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 SOWAHAQ2M3V2 549 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 ZNF699Q32M78 642 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 WDR72Q3MJ13 1102 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 ZNF667Q5HYK9 610 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 FAM171BQ6P995 826 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 LIMS2Q7Z4I7 341 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 FRMD5Q7Z6J6 570 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 RALGPS2Q86X27 583 aaPredicted RBP9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 GRAMD1CQ8IYS0 662 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 CMTM8Q8IZV2 173 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 TMC2Q8TDI7 906 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 GIPC2Q8TF65 315 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 TAF4BQ92750 862 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 MYLPFQ96A32 169 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 CLDN23Q96B33 292 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 TNIP3Q96KP6 325 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 MYRFLQ96LU7 910 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 IMPG2Q9BZV3 1241 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 ELOVL4Q9GZR5 314 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 VRTNQ9H8Y1 702 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 IL21Q9HBE4 155 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 RMND1Q9NWS8 449 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 GTF3C4Q9UKN8 822 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 MAGED2Q9UNF1 606 aaPredicted RBP9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 PTPRJQ12913 1337 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 TRAV19A0A0A6YYK7 116 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 SLC38A8A6NNN8 435 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 IKBKBO14920 756 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 KINO60870 393 aaKnown RBP9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 RHOBTB3O94955 611 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 KRT13P13646 458 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 HMGA1P17096 107 aaKnown RBP9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 TARSP26639 723 aaKnown RBP9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 CASP1P29466 404 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 CCR3P51677 355 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 NRLP54845 237 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 CYP4F8P98187 520 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 CYP27A1Q02318 531 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 STK4Q13043 487 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 KCNB1Q14721 858 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 NFIL3Q16649 462 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 SGSM1Q2NKQ1 1148 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 ITPRIPL2Q3MIP1 535 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 DGKKQ5KSL6 1271 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 KRBA2Q6ZNG9 492 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 INTS8Q75QN2 995 aaKnown RBP9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 MON1AQ86VX9 555 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 SCN4BQ8IWT1 228 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 SYNPOQ8N3V7 929 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 KIAA0895Q8NCT3 520 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 CCDC150Q8NCX0 1101 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 OR6B3Q8NGW1 331 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 MYCBPAPQ8TBZ2 947 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 PARD3BQ8TEW8 1205 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 KBTBD7Q8WVZ9 684 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 SPATA17Q96L03 361 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 PHOX2BQ99453 314 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 PKMYT1Q99640 499 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 CHRDQ9H2X0 955 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 TDP1Q9NUW8 608 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 TMLHEQ9NVH6 421 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 TRAF3IP3Q9Y228 551 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 PCDHGA2Q9Y5H1 932 aa9.7□□□□□ -0.86
SNORD88A-201ENST00000408314 A8MXQ7 604 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 ARNTLO00327 626 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 STX10O60499 249 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 SMC2O95347 1197 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 LMNAP02545 664 aaKnown RBP9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 F11P03951 625 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 CKMP06732 381 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 USP17L7P0C7H9 530 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 SP9P0CG40 484 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 F5P12259 2224 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 CYP2F1P24903 491 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 GRIK1P39086 918 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 NDUFA8P51970 172 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 PSMC1P62191 440 aaKnown RBP9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 CLDN10P78369 228 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 FAM160A1Q05DH4 1040 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 NCOA4Q13772 614 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 PDGFRLQ15198 375 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 DDR2Q16832 855 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 STXBP5Q5T5C0 1151 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 CEP135Q66GS9 1140 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 MAMSTRQ6ZN01 415 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 DENND5BQ6ZUT9 1274 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 OSTM1Q86WC4 334 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 GUF1Q8N442 669 aaKnown RBP9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 KIAA1958Q8N8K9 716 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 MAB21L3Q8N8X9 362 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms