RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 C19orf60Q96EN9 201 aa13.47□□□□□ -0.25
RNF43-201ENST00000407977 DMGDHQ9UI17 866 aaKnown RBP13.47□□□□□ -0.25
RNF43-201ENST00000407977 NRKQ7Z2Y5 1582 aa13.47□□□□□ -0.25
RNF43-201ENST00000407977 IGSF9BQ9UPX0 1349 aa13.47□□□□□ -0.25
RNF43-201ENST00000407977 CDC42BPGQ6DT37 1551 aa13.47□□□□□ -0.25
RNF43-201ENST00000407977 RNF103O00237 685 aa13.47□□□□□ -0.25
RNF43-201ENST00000407977 SEL1L3Q68CR1 1132 aa13.47□□□□□ -0.25
RNF43-201ENST00000407977 MTDHQ86UE4 582 aaKnown RBP13.47□□□□□ -0.25
RNF43-201ENST00000407977 SNX13Q9Y5W8 968 aa13.47□□□□□ -0.25
RNF43-201ENST00000407977 F8VZ95 297 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 KPNA4O00629 521 aaPredicted RBP13.46□□□□□ -0.25
RNF43-201ENST00000407977 MAFGO15525 162 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 TNFAIP8O95379 198 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 ZNF23P17027 643 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 RAD23AP54725 363 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 ILF2Q12905 390 aaKnown RBP13.46□□□□□ -0.25
RNF43-201ENST00000407977 CDKAL1Q5VV42 579 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 CCDC81Q6ZN84 652 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 ARHGAP22Q7Z5H3 698 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 FBXO25Q8TCJ0 367 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 SPATA33Q96N06 139 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 SH3GL1Q99961 368 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 LATS2Q9NRM7 1088 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 ANKEF1Q9NU02 776 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 ZBTB39O15060 712 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 TRIM24O15164 1050 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 CD4P01730 458 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 MYL3P08590 195 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 ADRA2BP18089 450 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 PSMA3P25788 255 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 WASHC5Q12768 1159 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 CCNG2Q16589 344 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 GPAT2Q6NUI2 795 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 TDRD3Q9H7E2 651 aaKnown RBP13.46□□□□□ -0.25
RNF43-201ENST00000407977 CNGB3Q9NQW8 809 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 BTBD7Q9P203 1132 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 GGA2Q9UJY4 613 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 EIF3LQ9Y262 564 aaKnown RBP13.46□□□□□ -0.25
RNF43-201ENST00000407977 GTF2H1P32780 548 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 ACOT2P49753 483 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 LRRC74AQ0VAA2 488 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 SYCP2LQ5T4T6 812 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 LAYNQ6UX15 382 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 LRRC8DQ7L1W4 858 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 RDM1Q8NG50 284 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 TFB1MQ8WVM0 346 aaKnown RBP13.46□□□□□ -0.25
RNF43-201ENST00000407977 TMEM120AQ9BXJ8 343 aa13.46□□□□□ -0.25
RNF43-201ENST00000407977 ASB14A6NK59 587 aa13.46□□□□□ -0.26
RNF43-201ENST00000407977 IMPDH2P12268 514 aa13.46□□□□□ -0.26
RNF43-201ENST00000407977 PTENP60484 403 aa13.46□□□□□ -0.26
RNF43-201ENST00000407977 TKFCQ3LXA3 575 aa13.46□□□□□ -0.26
RNF43-201ENST00000407977 ZFP1Q6P2D0 407 aa13.46□□□□□ -0.26
RNF43-201ENST00000407977 XRRA1Q6P2D8 792 aa13.46□□□□□ -0.26
RNF43-201ENST00000407977 TRIM65Q6PJ69 517 aa13.46□□□□□ -0.26
RNF43-201ENST00000407977 ZBTB49Q6ZSB9 765 aa13.46□□□□□ -0.26
RNF43-201ENST00000407977 SAR1AQ9NR31 198 aa13.46□□□□□ -0.26
RNF43-201ENST00000407977 CFAP65Q6ZU64 1925 aaKnown RBP13.46□□□□□ -0.26
RNF43-201ENST00000407977 PON1P27169 355 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 AQP5P55064 265 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 PDK2Q15119 407 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 UGT3A1Q6NUS8 523 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 FBXO36Q8NEA4 188 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 CELF1Q92879 486 aaKnown RBP13.45□□□□□ -0.26
RNF43-201ENST00000407977 ZNF518BQ9C0D4 1074 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 PARVBQ9HBI1 364 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 SNX9Q9Y5X1 595 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 SDR42E2A6NKP2 422 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 SSTR3P32745 418 aaPredicted RBP13.45□□□□□ -0.26
RNF43-201ENST00000407977 CACNB3P54284 484 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 HERVK_113P62684 666 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 SNX30Q5VWJ9 437 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 PLEKHA7Q6IQ23 1121 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 MARCH10Q8NA82 808 aaPredicted RBP13.45□□□□□ -0.26
RNF43-201ENST00000407977 ATP8B4Q8TF62 1192 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 MTERF3Q96E29 417 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 HES6Q96HZ4 224 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 SRP68Q9UHB9 627 aaKnown RBP13.45□□□□□ -0.26
RNF43-201ENST00000407977 TRAPPC3O43617 180 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 POU4F1Q01851 419 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 TFDP3Q5H9I0 405 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 CACHD1Q5VU97 1274 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 TTI2Q6NXR4 508 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 CROCCP3Q8IVE0 287 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 NMD3Q96D46 503 aaKnown RBP13.45□□□□□ -0.26
RNF43-201ENST00000407977 PAFAH2Q99487 392 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 BTBD10Q9BSF8 475 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 UBE2OQ9C0C9 1292 aaKnown RBP13.45□□□□□ -0.26
RNF43-201ENST00000407977 SYNDIG1LA6NDD5 238 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 SNAP23O00161 211 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 PLEKP08567 350 aaPredicted RBP13.45□□□□□ -0.26
RNF43-201ENST00000407977 PDHBP11177 359 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 VEPH1Q14D04 833 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 C11orf63Q6NUN7 778 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 LPCAT2Q7L5N7 544 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 UNC45BQ8IWX7 931 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 EXD1Q8NHP7 514 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 GLMNQ92990 594 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 IL1RL2Q9HB29 575 aa13.45□□□□□ -0.26
RNF43-201ENST00000407977 MAP3K20Q9NYL2 800 aaKnown RBP13.45□□□□□ -0.26
RNF43-201ENST00000407977 ITM2BQ9Y287 266 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms