RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SCN1AP35498 2009 aa26.01■■□□□ 1.75
DNMT3A-206ENST00000406659 GAS8O95995 478 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 KCNE1P15382 129 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 MRPS6P82932 125 aaKnown RBP26■■□□□ 1.75
DNMT3A-206ENST00000406659 HADHQ16836 314 aaKnown RBP26■■□□□ 1.75
DNMT3A-206ENST00000406659 NBPF20Q3BBV1 942 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 TTMPQ5BVD1 217 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 ACOT1Q86TX2 421 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 C12orf29Q8N999 325 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 CCDC114Q96M63 670 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 IPPQ9Y573 584 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 GOLGA6L10A6NI86 522 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 PGK1P00558 417 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 CALCOCO2Q13137 446 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 XKR4Q5GH76 650 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 SPDYCQ5MJ68 293 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 CEP85LQ5SZL2 805 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 KAZNQ674X7 775 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 TWF2Q6IBS0 349 aaKnown RBP26■■□□□ 1.75
DNMT3A-206ENST00000406659 CXCL17Q6UXB2 119 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 MFSD7Q6UXD7 560 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 SPOCD1Q6ZMY3 1216 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 RSPH3Q86UC2 560 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 OR6B3Q8NGW1 331 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 ZNF560Q96MR9 790 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 TXLNGYQ9BZA5 131 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 UPF3AQ9H1J1 476 aaKnown RBP26■■□□□ 1.75
DNMT3A-206ENST00000406659 ASIC3Q9UHC3 531 aa26■■□□□ 1.75
DNMT3A-206ENST00000406659 TJP3O95049 919 aa25.99■■□□□ 1.75
DNMT3A-206ENST00000406659 FLT3LGP49771 235 aa25.99■■□□□ 1.75
DNMT3A-206ENST00000406659 FBXO47Q5MNV8 452 aa25.99■■□□□ 1.75
DNMT3A-206ENST00000406659 POLNQ7Z5Q5 900 aa25.99■■□□□ 1.75
DNMT3A-206ENST00000406659 ANKS1BQ7Z6G8 1248 aa25.99■■□□□ 1.75
DNMT3A-206ENST00000406659 SESTD1Q86VW0 696 aa25.99■■□□□ 1.75
DNMT3A-206ENST00000406659 FAM228AQ86W67 206 aa25.99■■□□□ 1.75
DNMT3A-206ENST00000406659 UNC93AQ86WB7 457 aa25.99■■□□□ 1.75
DNMT3A-206ENST00000406659 EMC1Q8N766 993 aa25.99■■□□□ 1.75
DNMT3A-206ENST00000406659 ART4Q93070 314 aa25.99■■□□□ 1.75
DNMT3A-206ENST00000406659 GTF2IRD1Q9UHL9 959 aa25.99■■□□□ 1.75
DNMT3A-206ENST00000406659 PIRO00625 290 aa25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 KRT7P08729 469 aa25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 KRT10P13645 584 aa25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 PNPLA4P41247 253 aa25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 PTK6Q13882 451 aa25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 PPP1R26Q5T8A7 1209 aaPredicted RBP25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 FAM102AQ5T9C2 384 aaPredicted RBP25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 TXNRD3NBQ6F5E7 133 aa25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 OR6B2Q6IFH4 312 aa25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 SMG8Q8ND04 991 aaKnown RBP25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 WHRNQ9P202 907 aa25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 TRPV2Q9Y5S1 764 aa25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 CDY2AQ9Y6F7 541 aa25.98■■□□□ 1.75
DNMT3A-206ENST00000406659 LRRD1A4D1F6 860 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 H0YGN5 161 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 ALDH1A1P00352 501 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 RARBP10826 455 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 PTPN7P35236 360 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 SOWAHAQ2M3V2 549 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 RAPGEF5Q92565 580 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 ZWILCHQ9H900 591 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 HESX1Q9UBX0 185 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 NFS1Q9Y697 457 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 LRCH4O75427 683 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 PFKMP08237 780 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 PMS2P54278 862 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 ACAP1Q15027 740 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 TFDP3Q5H9I0 405 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 FAM47CQ5HY64 1035 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 ACSF2Q96CM8 615 aaPredicted RBP25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 FAM49BQ9NUQ9 324 aa25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 PDCD11Q14690 1871 aaKnown RBP25.97■■□□□ 1.75
DNMT3A-206ENST00000406659 A8MXQ7 604 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 KPNA7A9QM74 516 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 SEPT4O43236 478 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 RNF8O76064 485 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 ITIH2P19823 946 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 LMNB2Q03252 620 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 GDF6Q6KF10 455 aaPredicted RBP25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 OR2W6PQ8NHA6 318 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 SNF8Q96H20 258 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 HHIPL1Q96JK4 782 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 FAM118BQ9BPY3 351 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 DNAI2Q9GZS0 605 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 ASNSD1Q9NWL6 643 aa25.96■■□□□ 1.75
DNMT3A-206ENST00000406659 hCG_1818297A0A087WSY0 165 aa25.95■■□□□ 1.75
DNMT3A-206ENST00000406659 E5RJQ4 531 aa25.95■■□□□ 1.75
DNMT3A-206ENST00000406659 MYZAPP0CAP1 466 aa25.95■■□□□ 1.75
DNMT3A-206ENST00000406659 SETSIPP0DME0 302 aa25.95■■□□□ 1.75
DNMT3A-206ENST00000406659 TAF6P49848 677 aa25.95■■□□□ 1.75
DNMT3A-206ENST00000406659 SLC25A11Q02978 314 aaKnown RBP25.95■■□□□ 1.75
DNMT3A-206ENST00000406659 ARFGAP1Q8N6T3 406 aa25.95■■□□□ 1.75
DNMT3A-206ENST00000406659 SNX25Q9H3E2 840 aa25.95■■□□□ 1.75
DNMT3A-206ENST00000406659 TMBIM4Q9HC24 238 aa25.95■■□□□ 1.75
DNMT3A-206ENST00000406659 GDAP2Q9NXN4 497 aa25.95■■□□□ 1.75
DNMT3A-206ENST00000406659 TMEM88BA6NKF7 163 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 PIK3R2O00459 728 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 RPS6KA5O75582 802 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 ATF2P15336 505 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 GNL1P36915 607 aaPredicted RBP25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 CDKN2BP42772 138 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms