RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CSH2P0DML3 217 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 TNNI1P19237 187 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 CMA1P23946 247 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 CCNE1P24864 410 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 SOX9P48436 509 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 KRT85P78386 507 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 MTAPQ13126 283 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 DDR2Q16832 855 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 ZNF528Q3MIS6 628 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 ARHGAP29Q52LW3 1261 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 DPH6Q7L8W6 267 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 SPATA2LQ8IUW3 424 aaPredicted RBP16.46■□□□□ 0.23
TPM1-207ENST00000403994 CMTM8Q8IZV2 173 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 CSGALNACT1Q8TDX6 532 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 FAM3CQ92520 227 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 MYLPFQ96A32 169 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 TRMT2BQ96GJ1 504 aaKnown RBP16.46■□□□□ 0.23
TPM1-207ENST00000403994 MSANTD3Q96H12 275 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 SPATA32Q96LK8 384 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 SLC46A2Q9BY10 475 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 CHRDQ9H2X0 955 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 SEMA4AQ9H3S1 761 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 CRTAC1Q9NQ79 661 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 ZMYM5Q9UJ78 669 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 MAGED2Q9UNF1 606 aaPredicted RBP16.46■□□□□ 0.23
TPM1-207ENST00000403994 HPSEQ9Y251 543 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 CEP250Q9BV73 2442 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 MYBPHLA2RUH7 354 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 ATP2C2O75185 946 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 NOL4O94818 638 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 LMNAP02545 664 aaKnown RBP16.45■□□□□ 0.22
TPM1-207ENST00000403994 F11P03951 625 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 WARSP23381 471 aaKnown RBP16.45■□□□□ 0.22
TPM1-207ENST00000403994 LMO2P25791 158 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 DDX6P26196 483 aaKnown RBP eCLIP16.45■□□□□ 0.22
TPM1-207ENST00000403994 MLLT6P55198 1093 aaPredicted RBP16.45■□□□□ 0.22
TPM1-207ENST00000403994 RPL10AP62906 217 aaKnown RBP16.45■□□□□ 0.22
TPM1-207ENST00000403994 STK4Q13043 487 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 KMT5BQ4FZB7 885 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 FAM171BQ6P995 826 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 ADSSL1Q8N142 457 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 MAB21L3Q8N8X9 362 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 GOLGA5Q8TBA6 731 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 PLEKHO2Q8TD55 490 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 BPIFB1Q8TDL5 484 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 MMS19Q96T76 1030 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 CDH9Q9ULB4 789 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 CCL26Q9Y258 94 aa16.45■□□□□ 0.22
TPM1-207ENST00000403994 DNAH14Q0VDD8 3507 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 SPECC1L-ADORA2AF8WAN1 911 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 EXOC3O60645 756 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 CTHP32929 405 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 AVPR1AP37288 418 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 MAGEA11P43364 429 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 CASP4P49662 377 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 PLCB2Q00722 1185 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 CSTF1Q05048 431 aaKnown RBP16.44■□□□□ 0.22
TPM1-207ENST00000403994 TNK2Q07912 1038 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 WDR44Q5JSH3 913 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 TXNDC8Q6A555 127 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 C1orf228Q6PIY5 440 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 TXNDC11Q6PKC3 985 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 C4orf50Q6ZRC1 276 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 CELF5Q8N6W0 485 aaKnown RBP16.44■□□□□ 0.22
TPM1-207ENST00000403994 ZNF516Q92618 1163 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 MRPS31Q92665 395 aaKnown RBP16.44■□□□□ 0.22
TPM1-207ENST00000403994 MYRFLQ96LU7 910 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 MRPL45Q9BRJ2 306 aaKnown RBP16.44■□□□□ 0.22
TPM1-207ENST00000403994 IER2Q9BTL4 223 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 C8orf33Q9H7E9 229 aaPredicted RBP16.44■□□□□ 0.22
TPM1-207ENST00000403994 GTSE1Q9NYZ3 720 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 UXTQ9UBK9 157 aaPredicted RBP16.44■□□□□ 0.22
TPM1-207ENST00000403994 USP25Q9UHP3 1055 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 NME7Q9Y5B8 376 aa16.44■□□□□ 0.22
TPM1-207ENST00000403994 STAU1O95793 577 aaKnown RBP16.43■□□□□ 0.22
TPM1-207ENST00000403994 CST3P01034 146 aaPredicted RBP16.43■□□□□ 0.22
TPM1-207ENST00000403994 MYL1P05976 194 aa16.43■□□□□ 0.22
TPM1-207ENST00000403994 KPNA1P52294 538 aaPredicted RBP16.43■□□□□ 0.22
TPM1-207ENST00000403994 TNNC1P63316 161 aa16.43■□□□□ 0.22
TPM1-207ENST00000403994 MAPRE1Q15691 268 aaKnown RBP16.43■□□□□ 0.22
TPM1-207ENST00000403994 TDRD10Q5VZ19 366 aaKnown RBP16.43■□□□□ 0.22
TPM1-207ENST00000403994 SCN4BQ8IWT1 228 aa16.43■□□□□ 0.22
TPM1-207ENST00000403994 TTC8Q8TAM2 541 aa16.43■□□□□ 0.22
TPM1-207ENST00000403994 RIN3Q8TB24 985 aa16.43■□□□□ 0.22
TPM1-207ENST00000403994 NELL1Q92832 810 aa16.43■□□□□ 0.22
TPM1-207ENST00000403994 USP13Q92995 863 aaPredicted RBP16.43■□□□□ 0.22
TPM1-207ENST00000403994 XYLT2Q9H1B5 865 aa16.43■□□□□ 0.22
TPM1-207ENST00000403994 KCTD10Q9H3F6 313 aa16.43■□□□□ 0.22
TPM1-207ENST00000403994 KIF9Q9HAQ2 790 aa16.43■□□□□ 0.22
TPM1-207ENST00000403994 PCDHGA2Q9Y5H1 932 aa16.43■□□□□ 0.22
TPM1-207ENST00000403994 KIAA1549LQ6ZVL6 1849 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 FAM237AA0A1B0GTK4 181 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 LRRIQ3A6PVS8 624 aaPredicted RBP16.42■□□□□ 0.22
TPM1-207ENST00000403994 KINO60870 393 aaKnown RBP16.42■□□□□ 0.22
TPM1-207ENST00000403994 TACC1O75410 805 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 PDGFRBP09619 1106 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 PRR29P0C7W0 189 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 CHRNB1P11230 501 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 TDGF1P13385 188 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 BDNFP23560 247 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms