RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 ASS1P00966 412 aaKnown RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 ARL2P36404 184 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 MAP3K10Q02779 954 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 VGLL4Q14135 290 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 FAXCQ5TGI0 409 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 ARMC3Q5W041 872 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 JOSD2Q8TAC2 188 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 SLC16A10Q8TF71 515 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 TFAP2BQ92481 460 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 SPDL1Q96EA4 605 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 CFAP36Q96G28 342 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 CPB2Q96IY4 423 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 MIS12Q9H081 205 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 DDX56Q9NY93 547 aaKnown RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 COX16Q9P0S2 106 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 BTBD7Q9P203 1132 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 GGA2Q9UJY4 613 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 AFG3L2Q9Y4W6 797 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 MAFBQ9Y5Q3 323 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 BRWD3Q6RI45 1802 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 LTBP1Q14766 1721 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 ENO4A6NNW6 628 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 IGF2BP3O00425 579 aaKnown RBP eCLIP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 PRPSAP2O60256 369 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 STBD1O95210 358 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 INHBAP08476 426 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 P4HA1P13674 534 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 KRT4P19013 534 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 GCLCP48506 637 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 AP3M2P53677 418 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 ZNF280AP59817 542 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 TMEM62Q0P6H9 643 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 MYO1EQ12965 1108 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 EAPPQ56P03 285 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 FYB2Q5VWT5 728 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 CASC4Q6P4E1 433 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 METTL7BQ6UX53 244 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 MOB2Q70IA6 237 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 SPATA18Q8TC71 538 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 PPP1R13LQ8WUF5 828 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 LRRN4Q8WUT4 740 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 TTC17Q96AE7 1141 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 FAF2Q96CS3 445 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 ZBED3Q96IU2 234 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 TTC25Q96NG3 672 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 LBHD1Q9BQE6 289 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 C2orf40Q9H1Z8 148 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 NRXN2Q9P2S2 1712 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 PGAP2Q9UHJ9 254 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 PNMA3Q9UL41 463 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 ANKRD33BA6NCL7 494 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 MT-ND3P03897 115 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 VTNP04004 478 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 EDN1P05305 212 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 CETPP11597 493 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 PDGFRAP16234 1089 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 NRLP54845 237 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 VCPP55072 806 aaKnown RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 GRIK3Q13003 919 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 ITIH4Q14624 930 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 R3HDM1Q15032 1099 aaKnown RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 POTEAQ6S8J7 498 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 MPZL3Q6UWV2 235 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 ZPBP2Q6X784 338 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 ANKS1BQ7Z6G8 1248 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 SPOCK2Q92563 424 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 MMP19Q99542 508 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 FAM49AQ9H0Q0 323 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 SLCO1B3Q9NPD5 702 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 XPO7Q9UIA9 1087 aaKnown RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 A0A087WZ62 844 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 A0A0G2JND7 137 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 C5orf60A6NFR6 353 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 DDNO94850 711 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 IVDP26440 423 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 IRX4P78413 519 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 OGDHQ02218 1023 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 OVGP1Q12889 678 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 MPP2Q14168 576 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 TCEAL1Q15170 157 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 MFSD5Q6N075 450 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 LVRNQ6Q4G3 990 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 VSTM1Q6UX27 236 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 C15orf39Q6ZRI6 1047 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 TMEM192Q8IY95 271 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 ZCCHC9Q8N567 271 aaKnown RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 PPP1R14CQ8TAE6 165 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 MICAL1Q8TDZ2 1067 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 CKAP2Q8WWK9 683 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 ERP27Q96DN0 273 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 RSRC1Q96IZ7 334 aaKnown RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 LRRC37BQ96QE4 947 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 ACO2Q99798 780 aaKnown RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 FDXACB1Q9BRP7 624 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-201ENST00000401921 PDLIM7Q9NR12 457 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 FAM49BQ9NUQ9 324 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 GPATCH2LQ9NWQ4 482 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 TRIM33Q9UPN9 1127 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 L3MBTL1Q9Y468 752 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms