RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CCDC188H7C350 402 aa27.06■■□□□ 1.92
CPNE1-205ENST00000401607 SETSIPP0DME0 302 aa27.06■■□□□ 1.92
CPNE1-205ENST00000401607 KRT3P12035 628 aa27.06■■□□□ 1.92
CPNE1-205ENST00000401607 RFC1P35251 1148 aaPredicted RBP27.06■■□□□ 1.92
CPNE1-205ENST00000401607 AARSP49588 968 aaKnown RBP eCLIP27.06■■□□□ 1.92
CPNE1-205ENST00000401607 BFSP2Q13515 415 aa27.06■■□□□ 1.92
CPNE1-205ENST00000401607 GLE1Q53GS7 698 aaKnown RBP27.06■■□□□ 1.92
CPNE1-205ENST00000401607 CC2D1AQ6P1N0 951 aaPredicted RBP27.06■■□□□ 1.92
CPNE1-205ENST00000401607 SLC24A5Q71RS6 500 aa27.06■■□□□ 1.92
CPNE1-205ENST00000401607 KLHL7Q8IXQ5 586 aa27.06■■□□□ 1.92
CPNE1-205ENST00000401607 IPO4Q8TEX9 1081 aaKnown RBP27.06■■□□□ 1.92
CPNE1-205ENST00000401607 SLC35F5Q8WV83 523 aa27.06■■□□□ 1.92
CPNE1-205ENST00000401607 ST7Q9NRC1 585 aa27.06■■□□□ 1.92
CPNE1-205ENST00000401607 LCMT1Q9UIC8 334 aa27.06■■□□□ 1.92
CPNE1-205ENST00000401607 USTQ9Y2C2 406 aa27.06■■□□□ 1.92
CPNE1-205ENST00000401607 NBNO60934 754 aa27.05■■□□□ 1.92
CPNE1-205ENST00000401607 FAM189BP81408 668 aa27.05■■□□□ 1.92
CPNE1-205ENST00000401607 SLC7A5Q01650 507 aa27.05■■□□□ 1.92
CPNE1-205ENST00000401607 PMF1Q6P1K2 205 aa27.05■■□□□ 1.92
CPNE1-205ENST00000401607 NAP1L3Q99457 506 aaPredicted RBP27.05■■□□□ 1.92
CPNE1-205ENST00000401607 METTL5Q9NRN9 209 aaKnown RBP27.05■■□□□ 1.92
CPNE1-205ENST00000401607 HESX1Q9UBX0 185 aa27.05■■□□□ 1.92
CPNE1-205ENST00000401607 E5RJQ4 531 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 PSTPIP1O43586 416 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 ZMYND10O75800 440 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 EOMESO95936 686 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 PDE4CQ08493 712 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 CLUL1Q15846 466 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 RHOT1Q8IXI2 618 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 NIPA2Q8N8Q9 360 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 TNIP3Q96KP6 325 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 SLC4A5Q9BY07 1137 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 F8VP50 259 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 SEC31AO94979 1220 aaKnown RBP27.04■■□□□ 1.92
CPNE1-205ENST00000401607 RGS7P49802 495 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 TUSC3Q13454 348 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 TMCO3Q6UWJ1 677 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 CD300LGQ6UXG3 332 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 ANKRD52Q8NB46 1076 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 B3GALNT2Q8NCR0 500 aa27.04■■□□□ 1.92
CPNE1-205ENST00000401607 DDX47Q9H0S4 455 aaKnown RBP27.04■■□□□ 1.92
CPNE1-205ENST00000401607 PIK3R2O00459 728 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 ATP2C2O75185 946 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 TCF4P15884 667 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 ACAT1P24752 427 aaKnown RBP27.03■■□□□ 1.92
CPNE1-205ENST00000401607 ADORA2BP29275 332 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 PIGHQ14442 188 aaPredicted RBP27.03■■□□□ 1.92
CPNE1-205ENST00000401607 CCDC142Q17RM4 750 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 DSTYKQ6XUX3 929 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 FAM183BPQ6ZVS7 135 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 ADAT2Q7Z6V5 191 aaKnown RBP27.03■■□□□ 1.92
CPNE1-205ENST00000401607 ZDHHC14Q8IZN3 488 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 FNIP1Q8TF40 1166 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 HNRNPLLQ8WVV9 542 aaKnown RBP27.03■■□□□ 1.92
CPNE1-205ENST00000401607 FTHL17Q9BXU8 183 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 DNAI2Q9GZS0 605 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.03■■□□□ 1.92
CPNE1-205ENST00000401607 CEP350Q5VT06 3117 aa27.03■■□□□ 1.92
CPNE1-205ENST00000401607 RAD51CO43502 376 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 GABBR2O75899 941 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 TKTP29401 623 aaKnown RBP27.02■■□□□ 1.92
CPNE1-205ENST00000401607 MNX1P50219 401 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-205ENST00000401607 TIGD5Q53EQ6 642 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 CLLU1OSQ5K130 101 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 KIAA0319Q5VV43 1072 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 MTERF4Q7Z6M4 381 aaKnown RBP27.02■■□□□ 1.92
CPNE1-205ENST00000401607 SLC13A5Q86YT5 568 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-205ENST00000401607 TMEM86AQ8N2M4 240 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 EMC1Q8N766 993 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 SLC2A14Q8TDB8 520 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 STK32AQ8WU08 396 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 RUBCNQ92622 972 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 HINFPQ9BQA5 517 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 STIM2Q9P246 746 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 PITPNM1O00562 1244 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 PQBP1O60828 265 aaKnown RBP27.02■■□□□ 1.92
CPNE1-205ENST00000401607 ZRANB2O95218 330 aaKnown RBP eCLIP27.02■■□□□ 1.921e-6■■□□□ 12.9
CPNE1-205ENST00000401607 MCM3P25205 808 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 BCAT1P54687 386 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 BST2Q10589 180 aaKnown RBP27.02■■□□□ 1.92
CPNE1-205ENST00000401607 FAM102AQ5T9C2 384 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-205ENST00000401607 TMEM110Q86TL2 294 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 PIWIL1Q96J94 861 aaKnown RBP27.02■■□□□ 1.92
CPNE1-205ENST00000401607 MIS12Q9H081 205 aa27.02■■□□□ 1.92
CPNE1-205ENST00000401607 DDX43Q9NXZ2 648 aaKnown RBP27.02■■□□□ 1.92
CPNE1-205ENST00000401607 TIMM13Q9Y5L4 95 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-205ENST00000401607 SART1O43290 800 aaKnown RBP27.01■■□□□ 1.91
CPNE1-205ENST00000401607 HSPA6P17066 643 aa27.01■■□□□ 1.91
CPNE1-205ENST00000401607 PTPN1P18031 435 aaKnown RBP27.01■■□□□ 1.91
CPNE1-205ENST00000401607 PSMA2P25787 234 aa27.01■■□□□ 1.91
CPNE1-205ENST00000401607 PLEKHG4Q58EX7 1191 aa27.01■■□□□ 1.91
CPNE1-205ENST00000401607 OR6B2Q6IFH4 312 aa27.01■■□□□ 1.91
CPNE1-205ENST00000401607 KATNAL2Q8IYT4 538 aa27.01■■□□□ 1.91
CPNE1-205ENST00000401607 UROC1Q96N76 676 aa27.01■■□□□ 1.91
CPNE1-205ENST00000401607 ARFGAP3Q9NP61 516 aa27.01■■□□□ 1.91
CPNE1-205ENST00000401607 TSC2P49815 1807 aa27■■□□□ 1.91
CPNE1-205ENST00000401607 TCRBV7S2A1N4TA0A589 114 aa27■■□□□ 1.91
CPNE1-205ENST00000401607 B3GAT3O94766 335 aa27■■□□□ 1.91
CPNE1-205ENST00000401607 SSR1P43307 286 aaKnown RBP27■■□□□ 1.91
CPNE1-205ENST00000401607 GLB1LQ6UWU2 654 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms