RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 TTLL6Q8N841 843 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 PRRC2BQ5JSZ5 2229 aaKnown RBP9.98□□□□□ -0.81
CSMD1-202ENST00000400186 SERPINB8P50452 374 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 TMC5Q6UXY8 1006 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 KRT78Q8N1N4 520 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 MYCBPAPQ8TBZ2 947 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 EPS8L3Q8TE67 593 aaKnown RBP9.98□□□□□ -0.81
CSMD1-202ENST00000400186 FHOD1Q9Y613 1164 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 ZC3H13Q5T200 1668 aaKnown RBP9.98□□□□□ -0.81
CSMD1-202ENST00000400186 FAM196BA6NMK8 535 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 E7ENQ6 273 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 TRAPPC3O43617 180 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 PRDX5P30044 214 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 MTFR1Q15390 333 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 COL23A1Q86Y22 540 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-202ENST00000400186 SPRTNQ9H040 489 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-202ENST00000400186 KLHL31Q9H511 634 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 CNGB3Q9NQW8 809 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 NDUFA13Q9P0J0 144 aa9.98□□□□□ -0.81
CSMD1-202ENST00000400186 A0A1W2PQJ5 194 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 CLPTM1O96005 669 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 ALDH6A1Q02252 535 aaKnown RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 BNC2Q6ZN30 1099 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 C19orf18Q8NEA5 215 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 JADE3Q92613 823 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 PAPOLBQ9NRJ5 636 aaKnown RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 WHRNQ9P202 907 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 ZMYND8Q9ULU4 1186 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 RRM2P31350 389 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 ACOT2P49753 483 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 SUSD4Q5VX71 490 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 CENPLQ8N0S6 344 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 KCNB2Q92953 911 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 ZNF669Q96BR6 464 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 YIPF2Q9BWQ6 316 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 SNX13Q9Y5W8 968 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 TK2O00142 265 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 FXR1P51114 621 aaKnown RBP eCLIP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 NUDT18Q6ZVK8 323 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 SLC7A14Q8TBB6 771 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 OASLQ15646 514 aaKnown RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 DPF2Q92785 391 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 TMEM143Q96AN5 459 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 FRMD8Q9BZ67 464 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 RNPEPQ9H4A4 650 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 ARHGEF7Q14155 803 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 SHROOM1Q2M3G4 852 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 SYN2Q92777 582 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 PIN4Q9Y237 131 aaKnown RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 ASMTLO95671 621 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 BFSP2Q13515 415 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 CYP4A22Q5TCH4 519 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 CHMP1BQ7LBR1 199 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 UNC45BQ8IWX7 931 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 DGAT1O75907 488 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 CYBBP04839 570 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 DCAF6Q58WW2 860 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 C11orf96Q7Z7L8 435 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 LRRC6Q86X45 466 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 ANKRD49Q8WVL7 239 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 HNRNPLLQ8WVV9 542 aaKnown RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 ZNF333Q96JL9 665 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 GPR63Q9BZJ6 419 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 FCGR1AP12314 374 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 PTPN7P35236 360 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 TALDO1P37837 337 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 CHRNB3Q05901 458 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 TC2NQ8N9U0 490 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 CASKIN2Q8WXE0 1202 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 FAM49BQ9NUQ9 324 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 NMRK1Q9NWW6 199 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 WWOXQ9NZC7 414 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 HAO1Q9UJM8 370 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 NPM3O75607 178 aaKnown RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 CALB2P22676 271 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 COILP38432 576 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 PNKPQ96T60 521 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.97□□□□□ -0.81
CSMD1-202ENST00000400186 HEY2Q9UBP5 337 aa9.97□□□□□ -0.81
CSMD1-202ENST00000400186 A2ML1A8K2U0 1454 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 KCNJ1P48048 391 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 DPP10Q8N608 796 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 MINPP1Q9UNW1 487 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 ASCC3Q8N3C0 2202 aaKnown RBP9.96□□□□□ -0.81
CSMD1-202ENST00000400186 H7C1W4 665 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 CHI3L1P36222 383 aaPredicted RBP9.96□□□□□ -0.81
CSMD1-202ENST00000400186 C4orf22Q6V702 233 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 TPCN2Q8NHX9 752 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 NMD3Q96D46 503 aaKnown RBP9.96□□□□□ -0.81
CSMD1-202ENST00000400186 MASTLQ96GX5 879 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 ZNF512Q96ME7 567 aaPredicted RBP9.96□□□□□ -0.81
CSMD1-202ENST00000400186 NT5C1AQ9BXI3 368 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 PCDHB2Q9Y5E7 798 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.96□□□□□ -0.81
CSMD1-202ENST00000400186 GSG1L2A8MUP6 293 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 ALDH1A1P00352 501 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 PDGFRBP09619 1106 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 LTKP29376 864 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 MAPK7Q13164 816 aa9.96□□□□□ -0.81
CSMD1-202ENST00000400186 PKN2Q16513 984 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms