RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 AP4S1Q9Y587 144 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 CDC42BPGQ6DT37 1551 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 IQCA1LA6NCM1 817 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 EIF3HO15372 352 aaKnown RBP eCLIP12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 MAGEB2O15479 319 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 GTF2E2P29084 291 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 GALNTL6Q49A17 601 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 ATF7IP2Q5U623 682 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 KCTD17Q8N5Z5 321 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 DPP10Q8N608 796 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 UBA3Q8TBC4 463 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 OSBPL6Q9BZF3 934 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 EPC1Q9H2F5 836 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 PARVBQ9HBI1 364 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 USP27XA6NNY8 438 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 ATP6V1C1P21283 382 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 YWHAQP27348 245 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 KRT20P35900 424 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 GEMP55040 296 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 ZNF177Q13360 481 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 TRAPPC11Q7Z392 1133 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 FAR2Q96K12 515 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 CCT8L2Q96SF2 557 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 COL15A1P39059 1388 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 PCNAP12004 261 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 PBLDP30039 288 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 PLA2G4FQ68DD2 849 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 GLB1LQ6UWU2 654 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 CCDC149Q6ZUS6 474 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 MIER2Q8N344 545 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 ZNF333Q96JL9 665 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 FAM49BQ9NUQ9 324 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 NAGPAQ9UK23 515 aa12.78□□□□□ -0.36
CACNA1C-219ENST00000399649 FAM25AB3EWG3 89 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 FAM25CB3EWG5 89 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 FAM25GB3EWG6 89 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 CAPN1P07384 714 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 TMEM62Q0P6H9 643 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 STX5Q13190 355 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 PDIA5Q14554 519 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 HLFQ16534 295 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 C12orf60Q5U649 245 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 FHDC1Q9C0D6 1143 aaPredicted RBP12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 VHLP40337 213 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 ITGA8P53708 1063 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 GALCP54803 685 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 KLHL24Q6TFL4 600 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 SH3BP5LQ7L8J4 393 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 MB21D2Q8IYB1 491 aaPredicted RBP12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 RTL3Q8N8U3 475 aaKnown RBP12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 C9orf72Q96LT7 481 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 ZFYVE28Q9HCC9 887 aa12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 RUVBL2Q9Y230 463 aaKnown RBP12.77□□□□□ -0.36
CACNA1C-219ENST00000399649 ODC1P11926 461 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 GRK3P35626 688 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 SLC11A2P49281 568 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 HMGCS2P54868 508 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 NFIL3Q16649 462 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 CCDC157Q569K6 752 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 C11orf88Q6PI97 169 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 SLC44A2Q8IWA5 706 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 OR8H2Q8N162 312 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 LRRC71Q8N4P6 559 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 SLITRK1Q96PX8 696 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 RERGLQ9H628 205 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 STX7O15400 261 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 DYNC1LI2O43237 492 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 IFNA14P01570 189 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 MAGEA10P43363 369 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 PNKPQ96T60 521 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 VIPAS39Q9H9C1 493 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 KCND2Q9NZV8 630 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 ZNF23P17027 643 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 VSNL1P62760 191 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 MROH9Q5TGP6 573 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 FAM117BQ6P1L5 589 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 NT5DC4Q86YG4 428 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 ZNF669Q96BR6 464 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 PARK7Q99497 189 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 MTA3Q9BTC8 594 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 AAASQ9NRG9 546 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 DCDC2Q9UHG0 476 aa12.77□□□□□ -0.37
CACNA1C-219ENST00000399649 RFX7Q2KHR2 1363 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 PRR23AA6NEV1 266 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 KLHL18O94889 574 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 GSTM1P09488 218 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 JAK1P23458 1154 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 TALDO1P37837 337 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 CASP10Q92851 521 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 HDHD2Q9H0R4 259 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 SERHL2Q9H4I8 314 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 ZFYVE1Q9HBF4 777 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 SERHLQ9NQF3 203 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 MORC2Q9Y6X9 1032 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 H7C4K7 107 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 VPS26AO75436 327 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 CPSF4O95639 269 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 C6orf222P0C671 652 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 FAM200BP0CF97 657 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms