RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 TGM3Q08188 693 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 SCRN1Q12765 414 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 EMC2Q15006 297 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 DCAF6Q58WW2 860 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 ZNF280DQ6N043 979 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 LRRC8BQ6P9F7 803 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 EPM2AIP1Q7L775 607 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 IQCF2Q8IXL9 164 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 RIN3Q8TB24 985 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 NHEJ1Q9H9Q4 299 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 ADM5C9JUS6 153 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 VTNP04004 478 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 CENPCQ03188 943 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 XKR3Q5GH77 459 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 IYDQ6PHW0 289 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 VPS37AQ8NEZ2 397 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 FAM20AQ96MK3 541 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 SOX13Q9UN79 622 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 LRRC7Q96NW7 1537 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 ABCA6Q8N139 1617 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 PSMD3O43242 534 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 MTFR1Q15390 333 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 SNX30Q5VWJ9 437 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 LAYNQ6UX15 382 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 FAM124AQ86V42 546 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 SUSD6Q92537 303 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 AGBL1Q96MI9 1066 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 VTI1BQ9UEU0 232 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 TUBE1Q9UJT0 475 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 TSC22D4Q9Y3Q8 395 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 CRB1P82279 1406 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 NR3C1P04150 777 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 ZNF286BP0CG31 522 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 FAAH2Q6GMR7 532 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 LINC00116Q8NCU8 138 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 C18orf25Q96B23 403 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 KCNS3Q9BQ31 491 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 LIMA1Q9UHB6 759 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 DIS3Q9Y2L1 958 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 HMGB3O15347 200 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 MMEP08473 750 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 TAF6P49848 677 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 CSNK2BP67870 215 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 E2F4Q16254 413 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 DSG4Q86SJ6 1040 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 ELOA2Q8IYF1 753 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 OSBPL6Q9BZF3 934 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 SPG21Q9NZD8 308 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 NDRG2Q9UN36 371 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 TMA7Q9Y2S6 64 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 KDM6AO15550 1401 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 GOLGA8RI6L899 631 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 SH2B2O14492 632 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 ACSL4O60488 711 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 GRAP2O75791 330 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 HALP42357 657 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 PRKCEQ02156 737 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 TBC1D25Q3MII6 688 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 DPCR1Q3MIW9 517 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 PPP4R3CPQ6ZMV5 832 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 TRMT11Q7Z4G4 463 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 IPMKQ8NFU5 416 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 LCMT1Q9UIC8 334 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 SESN1Q9Y6P5 492 aa11.42□□□□□ -0.58
CACNA1C-210ENST00000399606 MTA2O94776 668 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 CYP19A1P11511 503 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 SYTL5Q8TDW5 730 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 ATG4CQ96DT6 458 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 ZC3H7BQ9UGR2 993 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 TMEM88BA6NKF7 163 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 IL10P22301 178 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 EFEMP1Q12805 493 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 LAMB3Q13751 1172 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 TRIP4Q15650 581 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 SLC44A2Q8IWA5 706 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 COG1Q8WTW3 980 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 DEFB118Q96PH6 123 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 COQ7Q99807 217 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 MRPL17Q9NRX2 175 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 V9GYQ6 96 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 NEO1Q92859 1461 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 NRXN1Q9ULB1 1477 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 KANSL1LA0AUZ9 987 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 MMP1P03956 469 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 S100A5P33763 92 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 CHI3L1P36222 383 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 CNTN1Q12860 1018 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 DDX39BQ13838 428 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 GET4Q7L5D6 327 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 MCOLN3Q8TDD5 553 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 CPB2Q96IY4 423 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 BTBD6Q96KE9 485 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 NUP85Q9BW27 656 aa11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 TRIT1Q9H3H1 467 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 KRCC1Q9NPI7 259 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 MRPL39Q9NYK5 338 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-210ENST00000399606 TRIM10Q9UDY6 481 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms