RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 CDH5P33151 784 aaPredicted RBP12.41□□□□□ -0.42
COL25A1-202ENST00000399127 CHKAP35790 457 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 FBXW10Q5XX13 1052 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 PPP1R2P3Q6NXS1 205 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 RUFY4Q6ZNE9 571 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 ZNF513Q8N8E2 541 aaPredicted RBP12.41□□□□□ -0.42
COL25A1-202ENST00000399127 BCAS4Q8TDM0 211 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 TMEM176AQ96HP8 235 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 SLITRK1Q96PX8 696 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 DDX23Q9BUQ8 820 aaKnown RBP12.41□□□□□ -0.42
COL25A1-202ENST00000399127 EIF2AQ9BY44 585 aaKnown RBP12.41□□□□□ -0.42
COL25A1-202ENST00000399127 ASB7Q9H672 318 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 SNTG2Q9NY99 539 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 CITO14578 2027 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 PPEF2O14830 753 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 AOC2O75106 756 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 MICAL2O94851 1124 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 GAS8O95995 478 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 MAN1A1P33908 653 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 LIG3P49916 1009 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 ITGA8P53708 1063 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 IQSEC1Q6DN90 963 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 GSTA5Q7RTV2 222 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 CATSPER4Q7RTX7 472 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 C12orf29Q8N999 325 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 ATL2Q8NHH9 583 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 MAIP1Q8WWC4 291 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 APOL6Q9BWW8 343 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 METTL5Q9NRN9 209 aaKnown RBP12.4□□□□□ -0.42
COL25A1-202ENST00000399127 MED7O43513 233 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 ACSL3O95573 720 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 SMIM10L2AP0DMW4 78 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 SMIM10L2BP0DMW5 78 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 ATF2P15336 505 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 IVDP26440 423 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 HOXA11P31270 313 aaPredicted RBP12.4□□□□□ -0.42
COL25A1-202ENST00000399127 GBP1P32455 592 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 NDST1P52848 882 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 DYNLT1P63172 113 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 HIC1Q14526 733 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 OLFML2BQ68BL8 750 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 GLIS1Q8NBF1 620 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 SLCO2A1Q92959 643 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 SNF8Q96H20 258 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 ZMAT2Q96NC0 199 aaKnown RBP12.4□□□□□ -0.42
COL25A1-202ENST00000399127 AAASQ9NRG9 546 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 SAE1Q9UBE0 346 aaPredicted RBP12.4□□□□□ -0.42
COL25A1-202ENST00000399127 DNPEPQ9ULA0 475 aa12.4□□□□□ -0.42
COL25A1-202ENST00000399127 PAEPP09466 180 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 LSP1P33241 339 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 RGS2P41220 211 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 CCT5P48643 541 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 SEC24CP53992 1094 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 ZNF200P98182 395 aaPredicted RBP12.39□□□□□ -0.43
COL25A1-202ENST00000399127 PTK6Q13882 451 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 SPOCD1Q6ZMY3 1216 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 ZNF365Q70YC5 407 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 XYLT1Q86Y38 959 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 ARFGAP1Q8N6T3 406 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 EPS8L3Q8TE67 593 aaKnown RBP12.39□□□□□ -0.43
COL25A1-202ENST00000399127 ARHGAP39Q9C0H5 1083 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 PCSK1NQ9UHG2 260 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 STRIP2Q9ULQ0 834 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 SCN1AP35498 2009 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 RIPK2O43353 540 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 NUDT17P0C025 328 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 IL1R2P27930 398 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 CTGFP29279 349 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 BEX3Q00994 111 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 PIGHQ14442 188 aaPredicted RBP12.39□□□□□ -0.43
COL25A1-202ENST00000399127 CCNG2Q16589 344 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 RCOR2Q8IZ40 523 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 GRK7Q8WTQ7 553 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 N4BP2L2Q92802 583 aaPredicted RBP12.39□□□□□ -0.43
COL25A1-202ENST00000399127 C18orf25Q96B23 403 aaPredicted RBP12.39□□□□□ -0.43
COL25A1-202ENST00000399127 RBM41Q96IZ5 413 aaKnown RBP12.39□□□□□ -0.43
COL25A1-202ENST00000399127 FAM107BQ9H098 131 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 LHX5Q9H2C1 402 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 ADAMTS10Q9H324 1103 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 CDC42EP4Q9H3Q1 356 aaKnown RBP12.39□□□□□ -0.43
COL25A1-202ENST00000399127 WHRNQ9P202 907 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 TUBGCP4Q9UGJ1 667 aa12.39□□□□□ -0.43
COL25A1-202ENST00000399127 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL25A1-202ENST00000399127 CA12O43570 354 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 LRCH4O75427 683 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 GRAP2O75791 330 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 ZSCAN5DPP0CG00 497 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 CYP2C9P11712 490 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 HOXD8P13378 290 aaPredicted RBP12.38□□□□□ -0.43
COL25A1-202ENST00000399127 RARGP13631 454 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 P4HA1P13674 534 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 ETS1P14921 441 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 CYP3A5P20815 502 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 AKAP5P24588 427 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 ATICP31939 592 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 MDH1P40925 334 aaKnown RBP12.38□□□□□ -0.43
COL25A1-202ENST00000399127 CETN2P41208 172 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 TM4SF4P48230 202 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 CDR1P51861 262 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 EIF3BP55884 814 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms