RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 ATG13O75143 517 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 PRPF6O94906 941 aaKnown RBP11.94□□□□□ -0.5
SRMP1-201ENST00000398959 PCSK1P29120 753 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 LHX1P48742 406 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 RBP5P82980 135 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 MYO1EQ12965 1108 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 DDR2Q16832 855 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 TMEM196Q5HYL7 178 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 PRR23CQ6ZRP0 262 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 STXBP4Q6ZWJ1 553 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 MON1AQ86VX9 555 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 WDR5BQ86VZ2 330 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 SPATA2LQ8IUW3 424 aaPredicted RBP11.94□□□□□ -0.5
SRMP1-201ENST00000398959 SCN4BQ8IWT1 228 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 CCDC65Q8IXS2 484 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 ADGRF2Q8IZF7 708 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 GPD1LQ8N335 351 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 TOP6BLQ8N6T0 577 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 PDILTQ8N807 584 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 TTC16Q8NEE8 873 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 SPATA18Q8TC71 538 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 NETO1Q8TDF5 533 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 EXOC4Q96A65 974 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 FAM84AQ96KN4 292 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 FGFBP2Q9BYJ0 223 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 HPS4Q9NQG7 708 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 SEMA4GQ9NTN9 838 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 GDAP2Q9NXN4 497 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 SLC8A2Q9UPR5 921 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 A0A087X0B3 334 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.93□□□□□ -0.5
SRMP1-201ENST00000398959 OTOL1A6NHN0 477 aaPredicted RBP11.93□□□□□ -0.5
SRMP1-201ENST00000398959 TRDMT1O14717 391 aaKnown RBP11.93□□□□□ -0.5
SRMP1-201ENST00000398959 KIAA0391O15091 583 aaKnown RBP11.93□□□□□ -0.5
SRMP1-201ENST00000398959 TNNC2P02585 160 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 CKMP06732 381 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 USP17L7P0C7H9 530 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 ARSAP15289 507 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 HOXA6P31267 233 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 ZNF268Q14587 947 aaPredicted RBP11.93□□□□□ -0.5
SRMP1-201ENST00000398959 SLC39A14Q15043 492 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 CSRP2Q16527 193 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 LMBRD2Q68DH5 695 aaPredicted RBP11.93□□□□□ -0.5
SRMP1-201ENST00000398959 FSTL4Q6MZW2 842 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 OSTM1Q86WC4 334 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
SRMP1-201ENST00000398959 FSIP1Q8NA03 581 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 TRMT2BQ96GJ1 504 aaKnown RBP11.93□□□□□ -0.5
SRMP1-201ENST00000398959 USP28Q96RU2 1077 aa11.93□□□□□ -0.5
SRMP1-201ENST00000398959 NCOR2Q9Y618 2525 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 MYO18AQ92614 2054 aaKnown RBP11.92□□□□□ -0.5
SRMP1-201ENST00000398959 TRAV19A0A0A6YYK7 116 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 FOXD2O60548 495 aaPredicted RBP11.92□□□□□ -0.5
SRMP1-201ENST00000398959 RNF40O75150 1001 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 TADA3O75528 432 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 RPP40O75818 363 aaKnown RBP11.92□□□□□ -0.5
SRMP1-201ENST00000398959 NOL4O94818 638 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 EGFP01133 1207 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 CCDC192P0DO97 292 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 DRD1P21728 446 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 HOXC13P31276 330 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 PXNP49023 591 aaPredicted RBP11.92□□□□□ -0.5
SRMP1-201ENST00000398959 FAM160A1Q05DH4 1040 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 MTF1Q14872 753 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 PDGFRLQ15198 375 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 STK38Q15208 465 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 SURF1Q15526 300 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 CCDC142Q17RM4 750 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 SOWAHAQ2M3V2 549 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 CFAP221Q4G0U5 840 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 SCARA3Q6AZY7 606 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 PKN3Q6P5Z2 889 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 C4orf50Q6ZRC1 276 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 CPA6Q8N4T0 437 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 CXorf38Q8TB03 319 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 ATP2A3Q93084 1043 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 FUBP3Q96I24 572 aaKnown RBP eCLIP11.92□□□□□ -0.5
SRMP1-201ENST00000398959 HPDLQ96IR7 371 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 MYRFLQ96LU7 910 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 PKMYT1Q99640 499 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 P2RY13Q9BPV8 354 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 LRRC27Q9C0I9 530 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 ZSCAN16Q9H4T2 348 aaPredicted RBP11.92□□□□□ -0.5
SRMP1-201ENST00000398959 FOXD4L1Q9NU39 408 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 INTS13Q9NVM9 706 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 DUS2Q9NX74 493 aaKnown RBP11.92□□□□□ -0.5
SRMP1-201ENST00000398959 SIX4Q9UIU6 781 aa11.92□□□□□ -0.5
SRMP1-201ENST00000398959 MORC2Q9Y6X9 1032 aaPredicted RBP11.92□□□□□ -0.5
SRMP1-201ENST00000398959 LAMA1P25391 3075 aa11.91□□□□□ -0.5
SRMP1-201ENST00000398959 ZNF233A6NK53 670 aa11.91□□□□□ -0.5
SRMP1-201ENST00000398959 GABRDO14764 452 aa11.91□□□□□ -0.5
SRMP1-201ENST00000398959 SLC30A4O14863 429 aa11.91□□□□□ -0.5
SRMP1-201ENST00000398959 AXIN1O15169 862 aa11.91□□□□□ -0.5
SRMP1-201ENST00000398959 HCRTO43612 131 aa11.91□□□□□ -0.5
SRMP1-201ENST00000398959 GJA4P35212 333 aa11.91□□□□□ -0.5
SRMP1-201ENST00000398959 IFNAR2P48551 515 aa11.91□□□□□ -0.5
SRMP1-201ENST00000398959 GALK1P51570 392 aa11.91□□□□□ -0.5
SRMP1-201ENST00000398959 PSMC1P62191 440 aaKnown RBP11.91□□□□□ -0.5
SRMP1-201ENST00000398959 KCNB1Q14721 858 aa11.91□□□□□ -0.5
SRMP1-201ENST00000398959 DUOXA2Q1HG44 320 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms