RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 TMC8Q8IU68 726 aa15.22■□□□□ 0.03
HDDC2-202ENST00000398153 TRIM59Q8IWR1 403 aa15.22■□□□□ 0.03
HDDC2-202ENST00000398153 TRMT2BQ96GJ1 504 aaKnown RBP15.22■□□□□ 0.03
HDDC2-202ENST00000398153 PCED1BQ96HM7 432 aa15.22■□□□□ 0.03
HDDC2-202ENST00000398153 SPATA17Q96L03 361 aa15.22■□□□□ 0.03
HDDC2-202ENST00000398153 ELOVL4Q9GZR5 314 aa15.22■□□□□ 0.03
HDDC2-202ENST00000398153 MMRN2Q9H8L6 949 aa15.22■□□□□ 0.03
HDDC2-202ENST00000398153 UXTQ9UBK9 157 aaPredicted RBP15.22■□□□□ 0.03
HDDC2-202ENST00000398153 ATP2C2O75185 946 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 MYL4P12829 197 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 PSMC1P62191 440 aaKnown RBP15.21■□□□□ 0.03
HDDC2-202ENST00000398153 CYP27A1Q02318 531 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 SIGLEC14Q08ET2 396 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 HTR4Q13639 388 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 FAM114A1Q8IWE2 563 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 HS6ST3Q8IZP7 471 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 MYLPFQ96A32 169 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 E2F7Q96AV8 911 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 MYRFLQ96LU7 910 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 EPHX3Q9H6B9 360 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 APOBEC3GQ9HC16 384 aaKnown RBP15.21■□□□□ 0.03
HDDC2-202ENST00000398153 NME7Q9Y5B8 376 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.21■□□□□ 0.03
HDDC2-202ENST00000398153 MYO10Q9HD67 2058 aa15.21■□□□□ 0.03
HDDC2-202ENST00000398153 PTPRDP23468 1912 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 HCRTO43612 131 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 ECI2O75521 394 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 SOAT2O75908 522 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 NOL4O94818 638 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 PTMSP20962 102 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 TBXAS1P24557 533 aaPredicted RBP15.2■□□□□ 0.02
HDDC2-202ENST00000398153 DDX6P26196 483 aaKnown RBP eCLIP15.2■□□□□ 0.024e-8■■■□□ 14.7
HDDC2-202ENST00000398153 ANXA13P27216 316 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 WEE1P30291 646 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 GRIK1P39086 918 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 CCR2P41597 374 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 YWHAEP62258 255 aaKnown RBP15.2■□□□□ 0.02
HDDC2-202ENST00000398153 TPD52L1Q16890 204 aaPredicted RBP15.2■□□□□ 0.02
HDDC2-202ENST00000398153 DPCR1Q3MIW9 517 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 ARHGAP15Q53QZ3 475 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 MDH1BQ5I0G3 518 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 SMYD5Q6GMV2 418 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 SPOPLQ6IQ16 392 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 SCARA5Q6ZMJ2 495 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 TRIM67Q6ZTA4 783 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 SLC44A3Q8N4M1 653 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 SEMA4DQ92854 862 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 C8orf48Q96LL4 319 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 GCNAQ96QF7 691 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 LPIN3Q9BQK8 851 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 NT5C1AQ9BXI3 368 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 SDCBP2Q9H190 292 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 THAP9Q9H5L6 903 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 TRPV4Q9HBA0 871 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 DUSP12Q9UNI6 340 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 TRIOO75962 3097 aa15.2■□□□□ 0.02
HDDC2-202ENST00000398153 PRR33A8MZF0 331 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 CILPO75339 1184 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 MOSPD3O75425 235 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 AFPP02771 609 aaKnown RBP15.19■□□□□ 0.02
HDDC2-202ENST00000398153 ASGR2P07307 311 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 HMGA1P17096 107 aaKnown RBP15.19■□□□□ 0.02
HDDC2-202ENST00000398153 CEBPBP17676 345 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 BDNFP23560 247 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 GABRR2P28476 465 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 RAP1GAPP47736 663 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 PPP3CCP48454 512 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 NDST1P52848 882 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 KCNH2Q12809 1159 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 DDR2Q16832 855 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 TMEM31Q5JXX7 168 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 CCDC183Q5T5S1 534 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 GAREM2Q75VX8 874 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 BMP8AQ7Z5Y6 402 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 SHKBP1Q8TBC3 707 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 ELSPBP1Q96BH3 223 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 TCEAL4Q96EI5 215 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 MCRS1Q96EZ8 462 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 SMARCD1Q96GM5 515 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 DPEP3Q9H4B8 488 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 NUMBLQ9Y6R0 609 aa15.19■□□□□ 0.02
HDDC2-202ENST00000398153 A0A1W2PRU2 124 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 SLC38A8A6NNN8 435 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 SRFP11831 508 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 SASS6Q6UVJ0 657 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 DENND5BQ6ZUT9 1274 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 ACOT1Q86TX2 421 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 SCN4BQ8IWT1 228 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 GIPC2Q8TF65 315 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 ING5Q8WYH8 240 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 FGF14Q92915 247 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 SMARCD2Q92925 531 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 JAKMIP2Q96AA8 810 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 CNOT6LQ96LI5 555 aaKnown RBP15.18■□□□□ 0.02
HDDC2-202ENST00000398153 FAM81BQ96LP2 452 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 ASB16Q96NS5 453 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 MED15Q96RN5 788 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 B3GNT5Q9BYG0 378 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 ATXN3LQ9H3M9 355 aa15.18■□□□□ 0.02
HDDC2-202ENST00000398153 IL21Q9HBE4 155 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms