RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ANKS4BQ8N8V4 417 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 C1orf127Q8N9H9 656 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TWNKQ96RR1 684 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SH3GL3Q99963 347 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 RPF1Q9H9Y2 349 aaKnown RBP19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 PPME1Q9Y570 386 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SCTRP47872 440 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 IREB2P48200 963 aaKnown RBP19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TFDP1Q14186 410 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CPXM1Q96SM3 734 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 MPHOSPH6Q99547 160 aaKnown RBP19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SMYD3Q9H7B4 428 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 FGFR1OP2Q9NVK5 253 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ANK1P16157 1881 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SGK1O00141 431 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CDH16O75309 829 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TCEA3O75764 348 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SLC25A27O95847 323 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 GBP2P32456 591 aaPredicted RBP19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 PEX19P40855 299 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 VCPP55072 806 aaKnown RBP19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 PSMC1P62191 440 aaKnown RBP19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TTLL12Q14166 644 aaPredicted RBP19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 OASLQ15646 514 aaKnown RBP19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ZNF667Q5HYK9 610 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ERO1BQ86YB8 467 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SMARCAD1Q9H4L7 1026 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ACTR5Q9H9F9 607 aaPredicted RBP19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 AGTPBP1Q9UPW5 1226 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 GOLGA8MH3BSY2 632 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 LRCH4O75427 683 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ITGB3P05106 788 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 RAD23BP54727 409 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TAP1Q03518 808 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 DRICH1Q6PGQ1 229 aaPredicted RBP19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 RELL1Q8IUW5 271 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 GGT7Q9UJ14 662 aa19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TPX2Q9ULW0 747 aaKnown RBP19.3■□□□□ 0.68
CHRFAM7A-202ENST00000397827 DNAJC25-GNG10A0A024R161 153 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CCT8L1PA6NM43 557 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 LACTBL1A8MY62 500 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 COPS2P61201 443 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 YWHAEP62258 255 aaKnown RBP19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TMED2Q15363 201 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 DPH6Q7L8W6 267 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TAB3Q8N5C8 712 aaPredicted RBP19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 NIPA2Q8N8Q9 360 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SYNCQ9H7C4 482 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 IFT122Q9HBG6 1241 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 C3orf70A6NLC5 250 aaPredicted RBP19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 BANF1O75531 89 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 AP1G2O75843 785 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CD48P09326 243 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SLC25A11Q02978 314 aaKnown RBP19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 STAT4Q14765 748 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 NUGGCQ68CJ6 796 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 JADE1Q6IE81 842 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 FAM228AQ86W67 206 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 PARP9Q8IXQ6 854 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 EXOC8Q8IYI6 725 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 MRRFQ96E11 262 aaKnown RBP19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CPB2Q96IY4 423 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CCDC77Q9BR77 488 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 METTL5Q9NRN9 209 aaKnown RBP19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ADARB2Q9NS39 739 aaKnown RBP19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 DDX56Q9NY93 547 aaKnown RBP19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 PCSK1NQ9UHG2 260 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 STRIP2Q9ULQ0 834 aa19.29■□□□□ 0.68
CHRFAM7A-202ENST00000397827 HBP1O60381 514 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 STAG3L1P0CL83 205 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 LACTB2Q53H82 288 aaPredicted RBP19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TLDC1Q6P9B6 456 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ADAM33Q9BZ11 813 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 KDM4CQ9H3R0 1056 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 LGALS13Q9UHV8 139 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TNFSF13BQ9Y275 285 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 A0A087WZ62 844 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 EXOC1LA0A1B0GW35 172 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SIGLEC16A6NMB1 481 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 RASA4BC9J798 803 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 RASA4O43374 803 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ERBB2P04626 1255 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 POLR2BP30876 1174 aaKnown RBP19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 GDF10P55107 478 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SLC4A11Q8NBS3 891 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ACTL9Q8TC94 416 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CCHCR1Q8TD31 782 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 FDXACB1Q9BRP7 624 aaPredicted RBP19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 NSRP1Q9H0G5 558 aaKnown RBP19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 HAUS2Q9NVX0 235 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 EURLQ9NYK6 297 aa19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 DRG1Q9Y295 367 aaKnown RBP19.28■□□□□ 0.68
CHRFAM7A-202ENST00000397827 POC1B-GALNT4F8VUJ3 575 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SNX3O60493 162 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CST8O60676 142 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 INSRRP14616 1297 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 OTUD4Q01804 1114 aaKnown RBP19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 GAD2Q05329 585 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 MTM1Q13496 603 aa19.27■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ITIH4Q14624 930 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms