RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 TRIM43Q96BQ3 446 aaPredicted RBP16.26■□□□□ 0.19
PPM1F-202ENST00000397495 PKNOX2Q96KN3 472 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 HINFPQ9BQA5 517 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 FAM114A2Q9NRY5 505 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 NR2E1Q9Y466 385 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 CASTOR2A6NHX0 329 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 FAM153BP0C7A2 387 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 LRPAP1P30533 357 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 CHRNA3P32297 505 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 YWHAEP62258 255 aaKnown RBP16.26■□□□□ 0.19
PPM1F-202ENST00000397495 C1QBPQ07021 282 aaKnown RBP16.26■□□□□ 0.19
PPM1F-202ENST00000397495 FAM153CQ494X1 144 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 CLLU1OSQ5K130 101 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 GLB1LQ6UWU2 654 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 ZNF560Q96MR9 790 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 GDAP1L1Q96MZ0 367 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 TMEM161AQ9NX61 479 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 PCYOX1Q9UHG3 505 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 AMACRQ9UHK6 382 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 FAM153AQ9UHL3 310 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 PCDHB7Q9Y5E2 793 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 MICAL3Q7RTP6 2002 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 ESYT3A0FGR9 886 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 SPTLC1O15269 473 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 ATMINO43313 823 aaPredicted RBP16.25■□□□□ 0.19
PPM1F-202ENST00000397495 OPA1O60313 960 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 RNF40O75150 1001 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 TIMP1P01033 207 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 RAG1P15918 1043 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 GNA15P30679 374 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 PNPLA4P41247 253 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 NSFP46459 744 aaKnown RBP16.25■□□□□ 0.19
PPM1F-202ENST00000397495 TAF6P49848 677 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 CLCNKBP51801 687 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 GRIK3Q13003 919 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 TRADDQ15628 312 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 PLEKHA7Q6IQ23 1121 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 C12orf50Q8NA57 414 aaPredicted RBP16.25■□□□□ 0.19
PPM1F-202ENST00000397495 IFT81Q8WYA0 676 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 CYFIP2Q96F07 1278 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 RUNDC3BQ96NL0 473 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 PAAF1Q9BRP4 392 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 RAB17Q9H0T7 212 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 VPS18Q9P253 973 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 LRFN2Q9ULH4 789 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 TTC3P53804 2025 aa16.25■□□□□ 0.19
PPM1F-202ENST00000397495 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.24■□□□□ 0.19
PPM1F-202ENST00000397495 KPNA7A9QM74 516 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 PHF2O75151 1096 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 LSM8O95777 96 aaKnown RBP16.24■□□□□ 0.19
PPM1F-202ENST00000397495 IGFBP6P24592 240 aaPredicted RBP16.24■□□□□ 0.19
PPM1F-202ENST00000397495 CDH5P33151 784 aaPredicted RBP16.24■□□□□ 0.19
PPM1F-202ENST00000397495 MARCKSL1P49006 195 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 RWDD2BP57060 319 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 ORC1Q13415 861 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 SV2CQ496J9 727 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 SPDYCQ5MJ68 293 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 SEL1L2Q5TEA6 688 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 UBE2Q1Q7Z7E8 422 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 SLC13A5Q86YT5 568 aaPredicted RBP16.24■□□□□ 0.19
PPM1F-202ENST00000397495 PRELID2Q8N945 189 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 ZNF518BQ9C0D4 1074 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 CYP3A43Q9HB55 503 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 LCMT1Q9UIC8 334 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 ALPK3Q96L96 1907 aa16.24■□□□□ 0.19
PPM1F-202ENST00000397495 GOLGA8KD6RF30 607 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 PODXLO00592 558 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 FSCN2O14926 492 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 KIAA0355O15063 1070 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 TTI1O43156 1089 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 HSF2BPO75031 334 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 PYGMP11217 842 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 CSF2RAP15509 400 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 RRM1P23921 792 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 PTGIRP43119 386 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 LILRA4P59901 499 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 ZNF211Q13398 564 aaPredicted RBP16.23■□□□□ 0.19
PPM1F-202ENST00000397495 NOMO2Q5JPE7 1267 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 LIN9Q5TKA1 542 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 DUPD1Q68J44 220 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 URGCPQ8TCY9 931 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 ZNF606Q8WXB4 792 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 PIK3R5Q8WYR1 880 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 SLCO2A1Q92959 643 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 VWCEQ96DN2 955 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 PLVAPQ9BX97 442 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 FAM124BQ9H5Z6 455 aaPredicted RBP16.23■□□□□ 0.19
PPM1F-202ENST00000397495 ELAC1Q9H777 363 aaKnown RBP16.23■□□□□ 0.19
PPM1F-202ENST00000397495 MRPL47Q9HD33 250 aaKnown RBP16.23■□□□□ 0.19
PPM1F-202ENST00000397495 HMGXB4Q9UGU5 601 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 PCDHGC3Q9UN70 934 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 UTP11Q9Y3A2 253 aaKnown RBP16.23■□□□□ 0.19
PPM1F-202ENST00000397495 THAP12O43422 761 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 SPOPO43791 374 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 PROSCO94903 275 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 GBP1P32455 592 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 SSTR3P32745 418 aaPredicted RBP16.23■□□□□ 0.19
PPM1F-202ENST00000397495 MAN1A1P33908 653 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 RFC2P35250 354 aa16.23■□□□□ 0.19
PPM1F-202ENST00000397495 TUSC3Q13454 348 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms