RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CALML3P27482 149 aa8.8□□□□□ -1
NDE1-202ENST00000396355 SLC16A2P36021 539 aa8.8□□□□□ -1
NDE1-202ENST00000396355 STT3AP46977 705 aa8.8□□□□□ -1
NDE1-202ENST00000396355 PABPC4Q13310 644 aaKnown RBP eCLIP8.8□□□□□ -18e-7■■■■■ 32.1
NDE1-202ENST00000396355 CTC1Q2NKJ3 1217 aa8.8□□□□□ -1
NDE1-202ENST00000396355 SDE2Q6IQ49 451 aa8.8□□□□□ -1
NDE1-202ENST00000396355 ZNF786Q8N393 782 aa8.8□□□□□ -1
NDE1-202ENST00000396355 GIMAP8Q8ND71 665 aaPredicted RBP8.8□□□□□ -1
NDE1-202ENST00000396355 EME1Q96AY2 570 aa8.8□□□□□ -1
NDE1-202ENST00000396355 CSRNP1Q96S65 589 aa8.8□□□□□ -1
NDE1-202ENST00000396355 TIPINQ9BVW5 301 aa8.8□□□□□ -1
NDE1-202ENST00000396355 RTFDC1Q9BY42 306 aaPredicted RBP8.8□□□□□ -1
NDE1-202ENST00000396355 SH3GLB2Q9NR46 395 aa8.8□□□□□ -1
NDE1-202ENST00000396355 WDR90Q96KV7 1748 aa8.8□□□□□ -1
NDE1-202ENST00000396355 KLRG2A4D1S0 409 aaPredicted RBP8.8□□□□□ -1
NDE1-202ENST00000396355 MEI4A8MW99 385 aa8.8□□□□□ -1
NDE1-202ENST00000396355 PDLIM1O00151 329 aa8.8□□□□□ -1
NDE1-202ENST00000396355 EDIL3O43854 480 aa8.8□□□□□ -1
NDE1-202ENST00000396355 RHOBTB3O94955 611 aa8.8□□□□□ -1
NDE1-202ENST00000396355 FCER1AP12319 257 aa8.8□□□□□ -1
NDE1-202ENST00000396355 CREB1P16220 341 aa8.8□□□□□ -1
NDE1-202ENST00000396355 PLCG1P19174 1290 aa8.8□□□□□ -1
NDE1-202ENST00000396355 HMOX2P30519 316 aa8.8□□□□□ -1
NDE1-202ENST00000396355 MAGEA4P43358 317 aa8.8□□□□□ -1
NDE1-202ENST00000396355 CHN2P52757 468 aa8.8□□□□□ -1
NDE1-202ENST00000396355 OGFOD2Q6N063 350 aa8.8□□□□□ -1
NDE1-202ENST00000396355 PODNQ7Z5L7 613 aa8.8□□□□□ -1
NDE1-202ENST00000396355 DAGLBQ8NCG7 672 aa8.8□□□□□ -1
NDE1-202ENST00000396355 GRAMD1AQ96CP6 724 aa8.8□□□□□ -1
NDE1-202ENST00000396355 ACAP3Q96P50 834 aa8.8□□□□□ -1
NDE1-202ENST00000396355 DNAJC7Q99615 494 aa8.8□□□□□ -1
NDE1-202ENST00000396355 PABPC3Q9H361 631 aaKnown RBP8.8□□□□□ -1
NDE1-202ENST00000396355 SACM1LQ9NTJ5 587 aa8.8□□□□□ -1
NDE1-202ENST00000396355 SLC12A6Q9UHW9 1150 aa8.8□□□□□ -1
NDE1-202ENST00000396355 ANAPC5Q9UJX4 755 aa8.8□□□□□ -1
NDE1-202ENST00000396355 USTQ9Y2C2 406 aa8.8□□□□□ -1
NDE1-202ENST00000396355 HEMK1Q9Y5R4 338 aaPredicted RBP8.8□□□□□ -1
NDE1-202ENST00000396355 CFAP99D6REC4 459 aa8.79□□□□□ -1
NDE1-202ENST00000396355 CCDC188H7C350 402 aa8.79□□□□□ -1
NDE1-202ENST00000396355 CPA3P15088 417 aa8.79□□□□□ -1
NDE1-202ENST00000396355 RCVRNP35243 200 aa8.79□□□□□ -1
NDE1-202ENST00000396355 PPARGP37231 505 aaPredicted RBP8.79□□□□□ -1
NDE1-202ENST00000396355 TNNI2P48788 182 aa8.79□□□□□ -1
NDE1-202ENST00000396355 CLK3P49761 638 aaKnown RBP8.79□□□□□ -1
NDE1-202ENST00000396355 NUP107P57740 925 aa8.79□□□□□ -1
NDE1-202ENST00000396355 ANKRD20A4Q4UJ75 823 aa8.79□□□□□ -1
NDE1-202ENST00000396355 ALKBH5Q6P6C2 394 aaKnown RBP8.79□□□□□ -1
NDE1-202ENST00000396355 AAGABQ6PD74 315 aa8.79□□□□□ -1
NDE1-202ENST00000396355 GPR141Q7Z602 305 aa8.79□□□□□ -1
NDE1-202ENST00000396355 CABP7Q86V35 215 aa8.79□□□□□ -1
NDE1-202ENST00000396355 ANKMY2Q8IV38 441 aa8.79□□□□□ -1
NDE1-202ENST00000396355 SYCE1Q8N0S2 351 aa8.79□□□□□ -1
NDE1-202ENST00000396355 ST13P5Q8NFI4 369 aaPredicted RBP8.79□□□□□ -1
NDE1-202ENST00000396355 ZNF296Q8WUU4 475 aaPredicted RBP8.79□□□□□ -1
NDE1-202ENST00000396355 SPOCK2Q92563 424 aa8.79□□□□□ -1
NDE1-202ENST00000396355 VMP1Q96GC9 406 aa8.79□□□□□ -1
NDE1-202ENST00000396355 TUBB6Q9BUF5 446 aa8.79□□□□□ -1
NDE1-202ENST00000396355 ARHGEF3Q9NR81 526 aa8.79□□□□□ -1
NDE1-202ENST00000396355 TTC7AQ9ULT0 858 aaPredicted RBP8.79□□□□□ -1
NDE1-202ENST00000396355 USP20Q9Y2K6 914 aa8.79□□□□□ -1
NDE1-202ENST00000396355 CSADQ9Y600 493 aa8.79□□□□□ -1
NDE1-202ENST00000396355 GOLGA8SH3BPF8 625 aa8.79□□□□□ -1
NDE1-202ENST00000396355 H3BSA7 217 aa8.79□□□□□ -1
NDE1-202ENST00000396355 GOLGA8MH3BSY2 632 aa8.79□□□□□ -1
NDE1-202ENST00000396355 DNALI1O14645 258 aaPredicted RBP8.79□□□□□ -1
NDE1-202ENST00000396355 WBP4O75554 376 aaKnown RBP8.79□□□□□ -1
NDE1-202ENST00000396355 IFI30P13284 250 aa8.79□□□□□ -1
NDE1-202ENST00000396355 ATF2P15336 505 aa8.79□□□□□ -1
NDE1-202ENST00000396355 SOX11P35716 441 aa8.79□□□□□ -1
NDE1-202ENST00000396355 IREB2P48200 963 aaKnown RBP8.79□□□□□ -1
NDE1-202ENST00000396355 TMPRSS15P98073 1019 aa8.79□□□□□ -1
NDE1-202ENST00000396355 GEN1Q17RS7 908 aa8.79□□□□□ -1
NDE1-202ENST00000396355 TCHHL1Q5QJ38 904 aaPredicted RBP8.79□□□□□ -1
NDE1-202ENST00000396355 USP17L2Q6R6M4 530 aa8.79□□□□□ -1
NDE1-202ENST00000396355 TMC3Q7Z5M5 1100 aa8.79□□□□□ -1
NDE1-202ENST00000396355 ECHDC2Q86YB7 292 aa8.79□□□□□ -1
NDE1-202ENST00000396355 MCRS1Q96EZ8 462 aa8.79□□□□□ -1
NDE1-202ENST00000396355 DHTKD1Q96HY7 919 aaPredicted RBP8.79□□□□□ -1
NDE1-202ENST00000396355 DEPDC7Q96QD5 511 aa8.79□□□□□ -1
NDE1-202ENST00000396355 HERC5Q9UII4 1024 aaKnown RBP8.79□□□□□ -1
NDE1-202ENST00000396355 ZBED1O96006 694 aa8.79□□□□□ -1
NDE1-202ENST00000396355 EGFRP00533 1210 aa8.79□□□□□ -1
NDE1-202ENST00000396355 CETN1Q12798 172 aa8.79□□□□□ -1
NDE1-202ENST00000396355 ACSBG2Q5FVE4 666 aa8.79□□□□□ -1
NDE1-202ENST00000396355 RARS2Q5T160 578 aaKnown RBP8.79□□□□□ -1
NDE1-202ENST00000396355 XKR5Q6UX68 686 aa8.79□□□□□ -1
NDE1-202ENST00000396355 CYP4V2Q6ZWL3 525 aaPredicted RBP8.79□□□□□ -1
NDE1-202ENST00000396355 CROCCP3Q8IVE0 287 aa8.79□□□□□ -1
NDE1-202ENST00000396355 RNF148Q8N7C7 305 aa8.79□□□□□ -1
NDE1-202ENST00000396355 DTX3Q8N9I9 347 aa8.79□□□□□ -1
NDE1-202ENST00000396355 KIAA0895Q8NCT3 520 aa8.79□□□□□ -1
NDE1-202ENST00000396355 OR6Y1Q8NGX8 325 aa8.79□□□□□ -1
NDE1-202ENST00000396355 AGR3Q8TD06 166 aa8.79□□□□□ -1
NDE1-202ENST00000396355 VPS50Q96JG6 964 aa8.79□□□□□ -1
NDE1-202ENST00000396355 MXD3Q9BW11 206 aa8.79□□□□□ -1
NDE1-202ENST00000396355 MRPL9Q9BYD2 267 aaKnown RBP8.79□□□□□ -1
NDE1-202ENST00000396355 TRIM9Q9C026 710 aa8.79□□□□□ -1
NDE1-202ENST00000396355 TPK1Q9H3S4 243 aa8.79□□□□□ -1
NDE1-202ENST00000396355 MYH10P35580 1976 aa8.79□□□□□ -1
NDE1-202ENST00000396355 CASP8AP2Q9UKL3 1982 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms