RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 FSCN2O14926 492 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 P4HA2O15460 535 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 MGRN1O60291 552 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 OATP04181 439 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 TAC1P20366 129 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 IVDP26440 423 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 RAD23BP54727 409 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 NCOA4Q13772 614 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 CAPSQ13938 189 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 CCDC6Q16204 474 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 HSDL1Q3SXM5 330 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 RAB6CQ53S08 254 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 TAF1BQ53T94 588 aaPredicted RBP9.77□□□□□ -0.85
NDE1-201ENST00000396354 C1orf228Q6PIY5 440 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 NPNTQ6UXI9 565 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 APBB1IPQ7Z5R6 666 aaPredicted RBP9.77□□□□□ -0.85
NDE1-201ENST00000396354 PALM2Q8IXS6 379 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 EIF1ADQ8N9N8 165 aaKnown RBP9.77□□□□□ -0.85
NDE1-201ENST00000396354 MAML1Q92585 1016 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 TIPINQ9BVW5 301 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 RAB6CQ9H0N0 254 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 ZNF302Q9NR11 478 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 PMM2O15305 246 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 CST8O60676 142 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 PROSCO94903 275 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 EDNRBP24530 442 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 ARL2P36404 184 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 CETN2P41208 172 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 OGDHQ02218 1023 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 PLCB4Q15147 1175 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 EML3Q32P44 896 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 PPP1R21Q6ZMI0 780 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 C3orf62Q6ZUJ4 267 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 RPAINQ86UA6 219 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 LONP2Q86WA8 852 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 LRRC6Q86X45 466 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 GRK7Q8WTQ7 553 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 PYROXD1Q8WU10 500 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 DCPSQ96C86 337 aaKnown RBP9.77□□□□□ -0.85
NDE1-201ENST00000396354 MAK16Q9BXY0 300 aaKnown RBP9.77□□□□□ -0.85
NDE1-201ENST00000396354 SPATC1LQ9H0A9 340 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 PORCNQ9H237 461 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 ZNF395Q9H8N7 513 aaPredicted RBP9.77□□□□□ -0.85
NDE1-201ENST00000396354 GPATCH2LQ9NWQ4 482 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 HOXC10Q9NYD6 342 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 SLC17A7Q9P2U7 560 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 SYNJ2BP-COX16A0A087WUM0 186 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 A0A1B0GUA9 196 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 FAM189A1O60320 539 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 DNAJC8O75937 253 aaPredicted RBP9.76□□□□□ -0.85
NDE1-201ENST00000396354 FGFR1P11362 822 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 PSMA2P25787 234 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 ATP5DP30049 168 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 MMRN1Q13201 1228 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 TRPC3Q13507 836 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 CUL2Q13617 745 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 TARBP2Q15633 366 aaKnown RBP9.76□□□□□ -0.85
NDE1-201ENST00000396354 STXBP2Q15833 593 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 MSS51Q4VC12 460 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 XKR3Q5GH77 459 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 GJC2Q5T442 439 aaPredicted RBP9.76□□□□□ -0.85
NDE1-201ENST00000396354 USP37Q86T82 979 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 NCAPG2Q86XI2 1143 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 HIPK4Q8NE63 616 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 ACTL9Q8TC94 416 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 CKAP2Q8WWK9 683 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 ZNF606Q8WXB4 792 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 RSAD2Q8WXG1 361 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 SERPINB12Q96P63 405 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 NUDCD1Q96RS6 583 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 RRAGCQ9HB90 399 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 COX16Q9P0S2 106 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 POLIQ9UNA4 740 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 INO80B-WBP1J3KQ70 363 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 MAFGO15525 162 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 TOP3BO95985 862 aaKnown RBP9.76□□□□□ -0.85
NDE1-201ENST00000396354 C4BPAP04003 597 aaKnown RBP9.76□□□□□ -0.85
NDE1-201ENST00000396354 ACO1P21399 889 aaKnown RBP9.76□□□□□ -0.85
NDE1-201ENST00000396354 ICAM3P32942 547 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 GJA5P36382 358 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 DRG2P55039 364 aaKnown RBP9.76□□□□□ -0.85
NDE1-201ENST00000396354 BMPR2Q13873 1038 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 ITIH4Q14624 930 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 LRRC36Q1X8D7 754 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 SH3PXD2AQ5TCZ1 1133 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 RFX6Q8HWS3 928 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 UBA3Q8TBC4 463 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 CYTH2Q99418 400 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 MECRQ9BV79 373 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 INO80BQ9C086 356 aaPredicted RBP9.76□□□□□ -0.85
NDE1-201ENST00000396354 ASCC2Q9H1I8 757 aaPredicted RBP9.76□□□□□ -0.85
NDE1-201ENST00000396354 NMRK2Q9NPI5 230 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 NOP53Q9NZM5 478 aaKnown RBP9.76□□□□□ -0.85
NDE1-201ENST00000396354 WHRNQ9P202 907 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 IKBKGQ9Y6K9 419 aa9.76□□□□□ -0.85
NDE1-201ENST00000396354 ADGRA2Q96PE1 1338 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 CNTNAP2Q9UHC6 1331 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 EME2A4GXA9 379 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms