RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 FAM81BQ96LP2 452 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 RIPOR3Q96MK2 946 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 ELOVL4Q9GZR5 314 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 APEX2Q9UBZ4 518 aa20.44■□□□□ 0.86
HOXA9-202ENST00000396345 SOAT2O75908 522 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 POU2F2P09086 479 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 CYP2F1P24903 491 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 MTHFRP42898 656 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 APBA1Q02410 837 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 CFAP221Q4G0U5 840 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 ZNF394Q53GI3 561 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 GJB7Q6PEY0 223 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 ENOSF1Q7L5Y1 443 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 SUSD6Q92537 303 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 KREMEN1Q96MU8 473 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 B3GNT5Q9BYG0 378 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 RHOBTB2Q9BYZ6 727 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 SIX2Q9NPC8 291 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 CDH22Q9UJ99 828 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 FAM50BQ9Y247 325 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 PCDHB4Q9Y5E5 795 aa20.43■□□□□ 0.86
HOXA9-202ENST00000396345 ACO1P21399 889 aaKnown RBP20.42■□□□□ 0.86
HOXA9-202ENST00000396345 BDNFP23560 247 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 KCNQ1P51787 676 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 RAD23BP54727 409 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 EPHB3P54753 998 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 MFAP3P55082 362 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 UBXN1Q04323 297 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 ELMOD1Q8N336 334 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 C12orf29Q8N999 325 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 SLC4A11Q8NBS3 891 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 JAKMIP2Q96AA8 810 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 TMEM176AQ96HP8 235 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 HEXIM2Q96MH2 286 aaKnown RBP20.42■□□□□ 0.86
HOXA9-202ENST00000396345 NECTIN4Q96NY8 510 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 MED10Q9BTT4 135 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 LSM14BQ9BX40 385 aaKnown RBP20.42■□□□□ 0.86
HOXA9-202ENST00000396345 XIRP2A4UGR9 3374 aa20.42■□□□□ 0.86
HOXA9-202ENST00000396345 C2orf16Q68DN1 1984 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 MAGEA11P43364 429 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 RPL10AP62906 217 aaKnown RBP20.41■□□□□ 0.86
HOXA9-202ENST00000396345 SMAD2Q15796 467 aaKnown RBP20.41■□□□□ 0.86
HOXA9-202ENST00000396345 FILIP1LQ4L180 1135 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 DPY19L2P1Q6NXN4 242 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 TMEM270Q6UE05 265 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 SCN4BQ8IWT1 228 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 ZNF512Q96ME7 567 aaPredicted RBP20.41■□□□□ 0.86
HOXA9-202ENST00000396345 ASB2Q96Q27 587 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 ZNF518BQ9C0D4 1074 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 FAM49BQ9NUQ9 324 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 CEP72Q9P209 647 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 ATP8B3O60423 1300 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 PTPRDP23468 1912 aa20.41■□□□□ 0.86
HOXA9-202ENST00000396345 CLDN5O00501 218 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 SERPINC1P01008 464 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 CCDC130P13994 396 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 PTPN2P17706 415 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 GRIK1P39086 918 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 CBX2Q14781 532 aaPredicted RBP20.4■□□□□ 0.86
HOXA9-202ENST00000396345 ARHGAP44Q17R89 818 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 KLHDC7AQ5VTJ3 777 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 IQCEQ6IPM2 695 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 VSTM1Q6UX27 236 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 GRASPQ7Z6J2 395 aaPredicted RBP20.4■□□□□ 0.86
HOXA9-202ENST00000396345 SLC2A14Q8TDB8 520 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 PLCB1Q9NQ66 1216 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 RTN4Q9NQC3 1192 aaKnown RBP20.4■□□□□ 0.86
HOXA9-202ENST00000396345 DNAJC12Q9UKB3 198 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 ASB3Q9Y575 518 aa20.4■□□□□ 0.86
HOXA9-202ENST00000396345 VCANP13611 3396 aa20.39■□□□□ 0.86
HOXA9-202ENST00000396345 IL9P15248 144 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 ATF6P18850 670 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 ADORA2BP29275 332 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 GPR15P49685 360 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 KLK7P49862 253 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 FANCCQ00597 558 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 VEPH1Q14D04 833 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 SYCP1Q15431 976 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 DDR2Q16832 855 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 PAQR9Q6ZVX9 377 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 ITIH5Q86UX2 942 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 FAM35AQ86V20 835 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 FUKQ8N0W3 1084 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 RNF214Q8ND24 703 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 GIPC2Q8TF65 315 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 CYFIP2Q96F07 1278 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 PCMTD1Q96MG8 357 aaPredicted RBP20.39■□□□□ 0.85
HOXA9-202ENST00000396345 HNRNPABQ99729 332 aaKnown RBP20.39■□□□□ 0.85
HOXA9-202ENST00000396345 HCFC1R1Q9NWW0 138 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 DNMT3BQ9UBC3 853 aaKnown RBP20.39■□□□□ 0.85
HOXA9-202ENST00000396345 SIK3Q9Y2K2 1263 aa20.39■□□□□ 0.85
HOXA9-202ENST00000396345 TRIM66O15016 1216 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 TEX33O43247 280 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 PAEPP09466 180 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 KRT5P13647 590 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 ANXA13P27216 316 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 NTHL1P78549 312 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 SDHAF4Q5VUM1 108 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 RBBP8NLQ8NC74 664 aaPredicted RBP20.38■□□□□ 0.85
HOXA9-202ENST00000396345 GPR152Q8TDT2 470 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms