RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 CCNE1P24864 410 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 CASP4P49662 377 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 CLDN10P78369 228 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 MYL7Q01449 175 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 TNK2Q07912 1038 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 VEPH1Q14D04 833 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 CMTM8Q8IZV2 173 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 ADSSL1Q8N142 457 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 ZBTB44Q8NCP5 570 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 FAM200AQ8TCP9 573 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 FAM3CQ92520 227 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 USP13Q92995 863 aaPredicted RBP17.34■□□□□ 0.37
CXCL12-206ENST00000395795 FAM83CQ9BQN1 747 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 MRPL45Q9BRJ2 306 aaKnown RBP17.34■□□□□ 0.37
CXCL12-206ENST00000395795 GTSE1Q9NYZ3 720 aa17.34■□□□□ 0.37
CXCL12-206ENST00000395795 PTPRDP23468 1912 aa17.33■□□□□ 0.37
CXCL12-206ENST00000395795 GREB1Q4ZG55 1949 aa17.33■□□□□ 0.37
CXCL12-206ENST00000395795 OTOL1A6NHN0 477 aaPredicted RBP17.33■□□□□ 0.36
CXCL12-206ENST00000395795 SLC38A8A6NNN8 435 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 LILRB5O75023 590 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 TNNC2P02585 160 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 DLATP10515 647 aaKnown RBP17.33■□□□□ 0.36
CXCL12-206ENST00000395795 MAGEA11P43364 429 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 PSMC1P62191 440 aaKnown RBP17.33■□□□□ 0.36
CXCL12-206ENST00000395795 KMT5BQ4FZB7 885 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 ARHGAP15Q53QZ3 475 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 TXNDC8Q6A555 127 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 TSSK4Q6SA08 328 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 BPIFB1Q8TDL5 484 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 CCDC127Q96BQ5 260 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 TRMT2BQ96GJ1 504 aaKnown RBP17.33■□□□□ 0.36
CXCL12-206ENST00000395795 FUBP3Q96I24 572 aaKnown RBP eCLIP17.33■□□□□ 0.36
CXCL12-206ENST00000395795 SLC22A12Q96S37 553 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 SYT15Q9BQS2 421 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 SEMA4AQ9H3S1 761 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 HPS4Q9NQG7 708 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 C2orf42Q9NWW7 574 aa17.33■□□□□ 0.36
CXCL12-206ENST00000395795 MRPS17Q9Y2R5 130 aaKnown RBP17.33■□□□□ 0.36
CXCL12-206ENST00000395795 TULP1O00294 542 aaPredicted RBP17.32■□□□□ 0.36
CXCL12-206ENST00000395795 LAMTOR5O43504 91 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 TACC1O75410 805 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 STAU1O95793 577 aaKnown RBP17.32■□□□□ 0.36
CXCL12-206ENST00000395795 LMNAP02545 664 aaKnown RBP17.32■□□□□ 0.36
CXCL12-206ENST00000395795 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 CSH1P0DML2 217 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 CSH2P0DML3 217 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 PCSK1P29120 753 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 HOXC13P31276 330 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 CTHP32929 405 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 CACNA2D1P54289 1103 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 MYL6P60660 151 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 CSTF1Q05048 431 aaKnown RBP17.32■□□□□ 0.36
CXCL12-206ENST00000395795 MYO1EQ12965 1108 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 ARHGAP29Q52LW3 1261 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 MON1AQ86VX9 555 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 MAB21L3Q8N8X9 362 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 TTC8Q8TAM2 541 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 MYLPFQ96A32 169 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 LMAN1LQ9HAT1 526 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 RBM12Q9NTZ6 932 aaKnown RBP17.32■□□□□ 0.36
CXCL12-206ENST00000395795 GCNT4Q9P109 453 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 CGNQ9P2M7 1197 aaKnown RBP17.32■□□□□ 0.36
CXCL12-206ENST00000395795 CDH9Q9ULB4 789 aa17.32■□□□□ 0.36
CXCL12-206ENST00000395795 ANAPC1Q9H1A4 1944 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 LRRIQ3A6PVS8 624 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-206ENST00000395795 SOBPA7XYQ1 873 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 SPECC1L-ADORA2AF8WAN1 911 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 NCAM2O15394 837 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 VNN1O95497 513 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 C4BPAP04003 597 aaKnown RBP17.31■□□□□ 0.36
CXCL12-206ENST00000395795 PDGFRBP09619 1106 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 NDUFA8P51970 172 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 USP46P62068 366 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 C1orf220Q5T0J3 134 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 TDRD10Q5VZ19 366 aaKnown RBP17.31■□□□□ 0.36
CXCL12-206ENST00000395795 HS2ST1Q7LGA3 356 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 SLC9A9Q8IVB4 645 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 CELF5Q8N6W0 485 aaKnown RBP17.31■□□□□ 0.36
CXCL12-206ENST00000395795 PARD3BQ8TEW8 1205 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 ELMO3Q96BJ8 720 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 PCED1BQ96HM7 432 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 GOLPH3LQ9H4A5 285 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 VRTNQ9H8Y1 702 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 MAGED2Q9UNF1 606 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-206ENST00000395795 DCHS1Q96JQ0 3298 aa17.31■□□□□ 0.36
CXCL12-206ENST00000395795 FAM163BP0C2L3 166 aa17.3■□□□□ 0.36
CXCL12-206ENST00000395795 TNNI1P19237 187 aa17.3■□□□□ 0.36
CXCL12-206ENST00000395795 RPL10AP62906 217 aaKnown RBP17.3■□□□□ 0.36
CXCL12-206ENST00000395795 DLG4P78352 724 aa17.3■□□□□ 0.36
CXCL12-206ENST00000395795 ZXDBP98169 803 aa17.3■□□□□ 0.36
CXCL12-206ENST00000395795 Q6ZS52 159 aa17.3■□□□□ 0.36
CXCL12-206ENST00000395795 SPATA2LQ8IUW3 424 aaPredicted RBP17.3■□□□□ 0.36
CXCL12-206ENST00000395795 YAF2Q8IY57 180 aa17.3■□□□□ 0.36
CXCL12-206ENST00000395795 CEP57L1Q8IYX8 460 aa17.3■□□□□ 0.36
CXCL12-206ENST00000395795 MYCBPAPQ8TBZ2 947 aa17.3■□□□□ 0.36
CXCL12-206ENST00000395795 MSANTD3Q96H12 275 aa17.3■□□□□ 0.36
CXCL12-206ENST00000395795 SDCBP2Q9H190 292 aa17.3■□□□□ 0.36
CXCL12-206ENST00000395795 DPEP3Q9H4B8 488 aa17.3■□□□□ 0.36
CXCL12-206ENST00000395795 C8orf33Q9H7E9 229 aaPredicted RBP17.3■□□□□ 0.36
CXCL12-206ENST00000395795 GKN1Q9NS71 199 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms