RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 MAGEF1Q9HAY2 307 aa19.34■□□□□ 0.69
CXCL12-204ENST00000395793 ZSCAN32Q9NX65 697 aa19.34■□□□□ 0.69
CXCL12-204ENST00000395793 PCDHGA2Q9Y5H1 932 aa19.34■□□□□ 0.69
CXCL12-204ENST00000395793 NOL4O94818 638 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 TNNC2P02585 160 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 HSP90AA1P07900 732 aaKnown RBP19.33■□□□□ 0.68
CXCL12-204ENST00000395793 CSH1P0DML2 217 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 CSH2P0DML3 217 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 LHX1P48742 406 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 SATB1Q01826 763 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 CYP24A1Q07973 514 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 DUOXA2Q1HG44 320 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 BMT2Q1RMZ1 405 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 CFAP221Q4G0U5 840 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 FAM171BQ6P995 826 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 MAMSTRQ6ZN01 415 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 Q6ZS52 159 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 CELF5Q8N6W0 485 aaKnown RBP19.33■□□□□ 0.68
CXCL12-204ENST00000395793 ZNF516Q92618 1163 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 CHFRQ96EP1 664 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 MSANTD3Q96H12 275 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 CGRRF1Q99675 332 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 SYT15Q9BQS2 421 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 KIAA1586Q9HCI6 787 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 SLC39A2Q9NP94 309 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 CRTAC1Q9NQ79 661 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 SERTAD1Q9UHV2 236 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 DCHS1Q96JQ0 3298 aa19.33■□□□□ 0.68
CXCL12-204ENST00000395793 ACTN4O43707 911 aaKnown RBP19.32■□□□□ 0.68
CXCL12-204ENST00000395793 KLRC4O43908 158 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 CST3P01034 146 aaPredicted RBP19.32■□□□□ 0.68
CXCL12-204ENST00000395793 DLATP10515 647 aaKnown RBP19.32■□□□□ 0.68
CXCL12-204ENST00000395793 PCSK1P29120 753 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 MYO1EQ12965 1108 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 PSMD6Q15008 389 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 DPH6Q7L8W6 267 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 SPATA2LQ8IUW3 424 aaPredicted RBP19.32■□□□□ 0.68
CXCL12-204ENST00000395793 PLEKHO2Q8TD55 490 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 MYLPFQ96A32 169 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 MRPL45Q9BRJ2 306 aaKnown RBP19.32■□□□□ 0.68
CXCL12-204ENST00000395793 IER2Q9BTL4 223 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 HPS4Q9NQG7 708 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 C2orf42Q9NWW7 574 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 FAM13BQ9NYF5 915 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 RCOR1Q9UKL0 485 aa19.32■□□□□ 0.68
CXCL12-204ENST00000395793 FRYLO94915 3013 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 CEP250Q9BV73 2442 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 OTOL1A6NHN0 477 aaPredicted RBP19.31■□□□□ 0.68
CXCL12-204ENST00000395793 WARSP23381 471 aaKnown RBP19.31■□□□□ 0.68
CXCL12-204ENST00000395793 HOXC13P31276 330 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 RPL10AP62906 217 aaKnown RBP19.31■□□□□ 0.68
CXCL12-204ENST00000395793 PON2Q15165 354 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 TRIM68Q6AZZ1 485 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 ATL3Q6DD88 541 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 MON1AQ86VX9 555 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 RALGPS2Q86X27 583 aaPredicted RBP19.31■□□□□ 0.68
CXCL12-204ENST00000395793 SCN4BQ8IWT1 228 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 KIAA2013Q8IYS2 634 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 XXYLT1Q8NBI6 393 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 ATRIPQ8WXE1 791 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 RUBCNQ92622 972 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 MRPS31Q92665 395 aaKnown RBP19.31■□□□□ 0.68
CXCL12-204ENST00000395793 CCDC127Q96BQ5 260 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 TRMT2BQ96GJ1 504 aaKnown RBP19.31■□□□□ 0.68
CXCL12-204ENST00000395793 FUBP3Q96I24 572 aaKnown RBP eCLIP19.31■□□□□ 0.68
CXCL12-204ENST00000395793 MYRFLQ96LU7 910 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 SLC22A12Q96S37 553 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 FAM83CQ9BQN1 747 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 EPC1Q9H2F5 836 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 GKN1Q9NS71 199 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 SMG5Q9UPR3 1016 aaKnown RBP19.31■□□□□ 0.68
CXCL12-204ENST00000395793 DMXL1Q9Y485 3027 aa19.31■□□□□ 0.68
CXCL12-204ENST00000395793 ATG2BQ96BY7 2078 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 PVALEFA0A1B0GWK0 134 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 PDIA4P13667 645 aaKnown RBP19.3■□□□□ 0.68
CXCL12-204ENST00000395793 DDX6P26196 483 aaKnown RBP eCLIP19.3■□□□□ 0.68
CXCL12-204ENST00000395793 MAGEA11P43364 429 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 PLCB2Q00722 1185 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 DMWDQ09019 674 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 C12orf56Q8IXR9 622 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 KIAA0895Q8NCT3 520 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 HINFPQ9BQA5 517 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 ZMYM5Q9UJ78 669 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 CDH9Q9ULB4 789 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 ZDHHC9Q9Y397 364 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 MYO16Q9Y6X6 1858 aa19.3■□□□□ 0.68
CXCL12-204ENST00000395793 PDGFRBP09619 1106 aa19.29■□□□□ 0.68
CXCL12-204ENST00000395793 ARSAP15289 507 aa19.29■□□□□ 0.68
CXCL12-204ENST00000395793 TNNI1P19237 187 aa19.29■□□□□ 0.68
CXCL12-204ENST00000395793 AVPR1AP37288 418 aa19.29■□□□□ 0.68
CXCL12-204ENST00000395793 CASP4P49662 377 aa19.29■□□□□ 0.68
CXCL12-204ENST00000395793 CCR3P51677 355 aa19.29■□□□□ 0.68
CXCL12-204ENST00000395793 SNRPFP62306 86 aaKnown RBP19.29■□□□□ 0.68
CXCL12-204ENST00000395793 CCINQ13939 588 aa19.29■□□□□ 0.68
CXCL12-204ENST00000395793 KNOP1Q1ED39 458 aaKnown RBP19.29■□□□□ 0.68
CXCL12-204ENST00000395793 ITPRIPL2Q3MIP1 535 aa19.29■□□□□ 0.68
CXCL12-204ENST00000395793 C1orf228Q6PIY5 440 aa19.29■□□□□ 0.68
CXCL12-204ENST00000395793 HS2ST1Q7LGA3 356 aa19.29■□□□□ 0.68
CXCL12-204ENST00000395793 PCED1BQ96HM7 432 aa19.29■□□□□ 0.68
CXCL12-204ENST00000395793 TDP1Q9NUW8 608 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms