RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 CXCL11O14625 94 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CIDEAO60543 219 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CHRNA1P02708 482 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 GPR89BP0CG08 455 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CTRB1P17538 263 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CKMT2P17540 419 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 HLA-DPA1P20036 260 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CCND1P24385 295 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 ALDH4A1P30038 563 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 ADCYAP1R1P41586 468 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 PTGER3P43115 390 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 MAGEA9P43362 315 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CAMLGP49069 296 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 NEK4P51957 841 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 GBX2P52951 348 aaPredicted RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 SSTP61278 116 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CUL1Q13616 776 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 COTL1Q14019 142 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 NONOQ15233 471 aaKnown RBP eCLIP4.48□□□□□ -1.693e-7■■■■□ 23.9
HERC4-204ENST00000395198 TRADDQ15628 312 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 SEZ6Q53EL9 994 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CTRB2Q6GPI1 263 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CAVIN1Q6NZI2 390 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 CCDC62Q6P9F0 684 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 DEGS2Q6QHC5 323 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 BEND4Q6ZU67 534 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 TTLL6Q8N841 843 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 ALS2CR12Q96Q35 445 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 ZNF341Q9BYN7 854 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CD244Q9BZW8 370 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 EPS8L2Q9H6S3 715 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 TMEM160Q9NX00 188 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 REREQ9P2R6 1566 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 hCG_1809904A0A1W2PP81 198 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 A0A1W2PPE2 198 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 A0A1W2PR64 198 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 GOLGA8SH3BPF8 625 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 RIMBP2O15034 1052 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 VEGFDO43915 354 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 H2AFYO75367 372 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 SOAT2O75908 522 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 SERPINF2P08697 491 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 QDPRP09417 244 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CCT4P50991 539 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 MRPL12P52815 198 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 MAPK10P53779 464 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CLNS1AP54105 237 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 RPS26P62854 115 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 LRMPQ12912 555 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CAMK2DQ13557 499 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 PMS2P11Q13670 270 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 IDI1Q13907 227 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 MAPRE2Q15555 327 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 TBCCQ15814 346 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 MAP3K11Q16584 847 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 KYNUQ16719 465 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 TMEM266Q2M3C6 531 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 SGO1Q5FBB7 561 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 IZUMO3Q5VZ72 239 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 SUSD1Q6UWL2 747 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 C3orf67Q6ZVT6 689 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 RHOUQ7L0Q8 258 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 KRT25Q7Z3Z0 450 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 R3HCC1LQ7Z5L2 792 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 PLEKHH3Q7Z736 793 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 ETNPPLQ8TBG4 499 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CACTINQ8WUQ7 758 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 RPRD1AQ96P16 312 aaPredicted RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 BBS2Q9BXC9 721 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 GGNBP2Q9H3C7 697 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 HIPK3Q9H422 1215 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 RAD21L1Q9H4I0 556 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 TTC26A0AVF1 554 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 DAPK3O43293 454 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ADAM20O43506 726 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CACNG3O60359 315 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 FBXO24O75426 580 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 RNF8O76064 485 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PIGNO95427 931 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ECDO95905 644 aaPredicted RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 PDGFAP04085 211 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 FGFR1P11362 822 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 MCM3P25205 808 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 NFKBIAP25963 317 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 GPR3P46089 330 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 XIAPP98170 497 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CBX3Q13185 183 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 KCNC3Q14003 757 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PFKFB4Q16877 469 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 MPP7Q5T2T1 576 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 SRGAP1Q7Z6B7 1085 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 TADA2BQ86TJ2 420 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 MOGAT3Q86VF5 341 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ETFBKMTQ8IXQ9 262 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CNTROBQ8N137 903 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 INPP5DQ92835 1189 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 OPTNQ96CV9 577 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 SCLYQ96I15 445 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 B3GNT5Q9BYG0 378 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 USP44Q9H0E7 712 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms