RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 ZDHHC16Q969W1 377 aa9.04□□□□□ -0.96
HERC4-203ENST00000395185 ELMO3Q96BJ8 720 aa9.04□□□□□ -0.96
HERC4-203ENST00000395185 ZNF830Q96NB3 372 aaPredicted RBP9.04□□□□□ -0.96
HERC4-203ENST00000395185 ARID3AQ99856 593 aa9.04□□□□□ -0.96
HERC4-203ENST00000395185 PAAF1Q9BRP4 392 aa9.04□□□□□ -0.96
HERC4-203ENST00000395185 VN1R3Q9BXE9 311 aa9.04□□□□□ -0.96
HERC4-203ENST00000395185 SDCBP2Q9H190 292 aa9.04□□□□□ -0.96
HERC4-203ENST00000395185 SFXN1Q9H9B4 322 aa9.04□□□□□ -0.96
HERC4-203ENST00000395185 PIDD1Q9HB75 910 aa9.04□□□□□ -0.96
HERC4-203ENST00000395185 NR2E1Q9Y466 385 aa9.04□□□□□ -0.96
HERC4-203ENST00000395185 BZW2Q9Y6E2 419 aaKnown RBP9.04□□□□□ -0.96
HERC4-203ENST00000395185 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.04□□□□□ -0.96
HERC4-203ENST00000395185 ANK1P16157 1881 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 ARHGAP6O43182 974 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 TACC1O75410 805 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 GFPT2O94808 682 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 GLP2RO95838 553 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 SERPING1P05155 500 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 PTMAP06454 111 aaKnown RBP9.03□□□□□ -0.96
HERC4-203ENST00000395185 ALADP13716 330 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 EPCAMP16422 314 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 CHRNB2P17787 502 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 FGFR3P22607 806 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 CLCN4P51793 760 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 CBX2Q14781 532 aaPredicted RBP9.03□□□□□ -0.96
HERC4-203ENST00000395185 ZNF699Q32M78 642 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 WDR72Q3MJ13 1102 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 ZNF667Q5HYK9 610 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 RARS2Q5T160 578 aaKnown RBP9.03□□□□□ -0.96
HERC4-203ENST00000395185 LIN9Q5TKA1 542 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 SYCE2Q6PIF2 218 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 ZNF662Q6ZS27 426 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 DPH6Q7L8W6 267 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 METTL23Q86XA0 190 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 CCDC170Q8IYT3 715 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 RNF168Q8IYW5 571 aaPredicted RBP9.03□□□□□ -0.96
HERC4-203ENST00000395185 PPM1KQ8N3J5 372 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 KREMEN2Q8NCW0 462 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 LNX1Q8TBB1 728 aaPredicted RBP9.03□□□□□ -0.96
HERC4-203ENST00000395185 DDX1Q92499 740 aaKnown RBP9.03□□□□□ -0.96
HERC4-203ENST00000395185 SPAG5Q96R06 1193 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 APOL5Q9BWW9 433 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 PHF7Q9BWX1 381 aaPredicted RBP9.03□□□□□ -0.96
HERC4-203ENST00000395185 S1PR5Q9H228 398 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 CHD7Q9P2D1 2997 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 CACNG4Q9UBN1 327 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 NOCTQ9UK39 431 aaKnown RBP9.03□□□□□ -0.96
HERC4-203ENST00000395185 DSEQ9UL01 958 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 ZKSCAN5Q9Y2L8 839 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 USP15Q9Y4E8 981 aaPredicted RBP9.03□□□□□ -0.96
HERC4-203ENST00000395185 BACE2Q9Y5Z0 518 aa9.03□□□□□ -0.96
HERC4-203ENST00000395185 EPN1Q9Y6I3 576 aaPredicted RBP9.03□□□□□ -0.96
HERC4-203ENST00000395185 CCDC195A0A1B0GUA6 201 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 EIF3CLB5ME19 914 aaKnown RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 F8W810 466 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 GABRDO14764 452 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 ZNF263O14978 683 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 TGM5O43548 720 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 CILPO75339 1184 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 PLEKP08567 350 aaPredicted RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 OR1D2P34982 312 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 RBM10P98175 930 aaKnown RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 PTK2Q05397 1052 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 MYO1EQ12965 1108 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 RAB33AQ14088 237 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 SOWAHAQ2M3V2 549 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 RTP2Q5QGT7 225 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 PRSS55Q6UWB4 352 aaPredicted RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 TMC5Q6UXY8 1006 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 CCDC149Q6ZUS6 474 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 ZNF571Q7Z3V5 609 aaPredicted RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 GPR149Q86SP6 731 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 CRYBG2Q8N1P7 616 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 THEM5Q8N1Q8 247 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 TTC39CQ8N584 583 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 C12orf76Q8N812 135 aaPredicted RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 C3orf58Q8NDZ4 430 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 CMASQ8NFW8 434 aaPredicted RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 VN1R2Q8NFZ6 395 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 SPATA18Q8TC71 538 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 SUSD6Q92537 303 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 ACSF2Q96CM8 615 aaPredicted RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 RPGRIP1Q96KN7 1286 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 SUSD3Q96L08 255 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 B3GALT6Q96L58 329 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 NECAB3Q96P71 396 aaPredicted RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 EIF3CQ99613 913 aaKnown RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 EPAS1Q99814 870 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 ZSWIM1Q9BR11 485 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 IMPG2Q9BZV3 1241 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 NHEJ1Q9H9Q4 299 aaPredicted RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 GOLGA2P5Q9HBQ8 144 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 MAN1C1Q9NR34 630 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 CISHQ9NSE2 258 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 ZNHIT6Q9NWK9 470 aaKnown RBP9.02□□□□□ -0.97
HERC4-203ENST00000395185 ZDHHC7Q9NXF8 308 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 MAFFQ9ULX9 164 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 PYCARDQ9ULZ3 195 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 POLIQ9UNA4 740 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 REXO2Q9Y3B8 237 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms