RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 CHURC1Q8WUH1 139 aa9.7□□□□□ -0.86
PFDN6-205ENST00000395134 JAM3Q9BX67 310 aa9.7□□□□□ -0.86
PFDN6-205ENST00000395134 UPF3AQ9H1J1 476 aaKnown RBP9.7□□□□□ -0.86
PFDN6-205ENST00000395134 TRIT1Q9H3H1 467 aaKnown RBP9.7□□□□□ -0.86
PFDN6-205ENST00000395134 PDGFCQ9NRA1 345 aa9.7□□□□□ -0.86
PFDN6-205ENST00000395134 IFT80Q9P2H3 777 aaPredicted RBP9.7□□□□□ -0.86
PFDN6-205ENST00000395134 TBX21Q9UL17 535 aa9.7□□□□□ -0.86
PFDN6-205ENST00000395134 LIMCH1Q9UPQ0 1083 aa9.7□□□□□ -0.86
PFDN6-205ENST00000395134 TIMM13Q9Y5L4 95 aaPredicted RBP9.7□□□□□ -0.86
PFDN6-205ENST00000395134 CCDC154A6NI56 674 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 NFIBO00712 420 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 SCDO00767 359 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 CTAGE5O15320 804 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 HTRA2O43464 458 aaPredicted RBP9.69□□□□□ -0.86
PFDN6-205ENST00000395134 SKAP2O75563 359 aaPredicted RBP9.69□□□□□ -0.86
PFDN6-205ENST00000395134 PDIA3P30101 505 aaKnown RBP9.69□□□□□ -0.86
PFDN6-205ENST00000395134 ELF1P32519 619 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 USP11P51784 963 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 PDE1AP54750 535 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 PSMC6P62333 389 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 MUM1Q2TAK8 710 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 UMODL1Q5DID0 1318 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 AGAP9Q5VTM2 703 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 SPATA1Q5VX52 437 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 ANKRD33Q7Z3H0 272 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 TBC1D10CQ8IV04 446 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 DTWD2Q8NBA8 298 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 PCSK9Q8NBP7 692 aaKnown RBP9.69□□□□□ -0.86
PFDN6-205ENST00000395134 AUTS2Q8WXX7 1259 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 C16orf92Q96LL3 132 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 COL25A1Q9BXS0 654 aaPredicted RBP9.69□□□□□ -0.86
PFDN6-205ENST00000395134 CPVLQ9H3G5 476 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 KMT5AQ9NQR1 393 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 CLDND1Q9NY35 253 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 ACTL7BQ9Y614 415 aa9.69□□□□□ -0.86
PFDN6-205ENST00000395134 A0A088AWK7 358 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 RBAK-RBAKDNI3L0D1 243 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 AXIN1O15169 862 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 DYNC1LI2O43237 492 aaPredicted RBP9.68□□□□□ -0.86
PFDN6-205ENST00000395134 TMCC2O75069 709 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 TIMP1P01033 207 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 RPN1P04843 607 aaKnown RBP9.68□□□□□ -0.86
PFDN6-205ENST00000395134 GNAT1P11488 350 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 VAV1P15498 845 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 CSF2RAP15509 400 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 TSHRP16473 764 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 CST5P28325 142 aaPredicted RBP9.68□□□□□ -0.86
PFDN6-205ENST00000395134 MAP2K3P46734 347 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 DUSP4Q13115 394 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 POSTNQ15063 836 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 EPHA7Q15375 998 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 SLC30A10Q6XR72 485 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 C8orf86Q6ZUL3 223 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 SV2AQ7L0J3 742 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 DMRTC2Q8IXT2 367 aaPredicted RBP9.68□□□□□ -0.86
PFDN6-205ENST00000395134 USP38Q8NB14 1042 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 DAGLBQ8NCG7 672 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 RILPL2Q969X0 211 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 TMEM47Q9BQJ4 181 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 HDAC8Q9BY41 377 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 AP5M1Q9H0R1 490 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 TRPV6Q9H1D0 765 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 SMYD2Q9NRG4 433 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 CYP39A1Q9NYL5 469 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 GRHPRQ9UBQ7 328 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 SYNPO2Q9UMS6 1093 aa9.68□□□□□ -0.86
PFDN6-205ENST00000395134 ELP1O95163 1332 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 NEDD4P46934 1319 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 MROH7Q68CQ1 1323 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 CCDC171Q6TFL3 1326 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 ASB14A6NK59 587 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 RNF225M0QZC1 329 aaPredicted RBP9.67□□□□□ -0.86
PFDN6-205ENST00000395134 MAN2B1O00754 1011 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 DEAF1O75398 565 aaPredicted RBP9.67□□□□□ -0.86
PFDN6-205ENST00000395134 TIAF1O95411 115 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 TMEM253P0C7T8 217 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 CALML3P27482 149 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 CALRP27797 417 aaKnown RBP9.67□□□□□ -0.86
PFDN6-205ENST00000395134 KRT9P35527 623 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 BCL6P41182 706 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 HSPA7P48741 367 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 CCL23P55773 120 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 BCAR1P56945 870 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 SPIRE1Q08AE8 756 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 BAATQ14032 418 aaPredicted RBP9.67□□□□□ -0.86
PFDN6-205ENST00000395134 PITRM1Q5JRX3 1037 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 SPECC1Q5M775 1068 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 CPZQ66K79 652 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 MFSD5Q6N075 450 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 CCDC62Q6P9F0 684 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 SPOCD1Q6ZMY3 1216 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 EP400NLQ6ZTU2 488 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 ESPNLQ6ZVH7 1005 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 FAM126BQ8IXS8 530 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 ZNF655Q8N720 491 aaPredicted RBP9.67□□□□□ -0.86
PFDN6-205ENST00000395134 C12orf50Q8NA57 414 aaPredicted RBP9.67□□□□□ -0.86
PFDN6-205ENST00000395134 COX4I2Q96KJ9 171 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 TOX2Q96NM4 488 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 PSMG3-AS1Q96PY0 264 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 CENPOQ9BU64 300 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms