RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 OGTO15294 1046 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 CDH2P19022 906 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-203ENST00000394872 GRIN1Q05586 938 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 DEFB128Q7Z7B8 93 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 RANBP17Q9H2T7 1088 aaKnown RBP10.81□□□□□ -0.68
COL4A6-203ENST00000394872 GPRC5CQ9NQ84 441 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 SLC39A10Q9ULF5 831 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 ARL2BPQ9Y2Y0 163 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 CKMP06732 381 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 MAGEA4P43358 317 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 PPP4CP60510 307 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 TGFB2P61812 414 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 MTM1Q13496 603 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 PHKG1Q16816 387 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 CLEC4FQ8N1N0 589 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 PCYOX1LQ8NBM8 494 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 RRAGCQ9HB90 399 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 RIC8BQ9NVN3 520 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 CHORDC1Q9UHD1 332 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-203ENST00000394872 SETBP1Q9Y6X0 1596 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 SNRPAP09012 282 aaKnown RBP10.8□□□□□ -0.68
COL4A6-203ENST00000394872 RBP3P10745 1247 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 EPHB3P54753 998 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 GEMP55040 296 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 BTKQ06187 659 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 TERF2Q15554 542 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 TTLL9Q3SXZ7 439 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 INTS5Q6P9B9 1019 aaKnown RBP10.8□□□□□ -0.68
COL4A6-203ENST00000394872 PRUNE1Q86TP1 453 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 HORMAD1Q86X24 394 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 NMRK2Q9NPI5 230 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 CACNA2D2Q9NY47 1150 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 A0A1W2PQJ5 194 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 RGL2O15211 777 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 TBC1D4O60343 1298 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 PBLDP30039 288 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-203ENST00000394872 ITGA8P53708 1063 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 LRIG3Q6UXM1 1119 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 IFNEQ86WN2 208 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 PPIL6Q8IXY8 311 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 TMCO5AQ8N6Q1 288 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 FAM167BQ9BTA0 163 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 SYTL2Q9HCH5 934 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 FAM47DPA6NHR8 397 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 ARHGEF9O43307 516 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 CDH16O75309 829 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 PTPN7P35236 360 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 CYTH1Q15438 398 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 ERAP2Q6P179 960 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 ZDHHC15Q96MV8 337 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 DSEQ9UL01 958 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 VPS9D1Q9Y2B5 631 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 VWA5AO00534 786 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 VSNL1P62760 191 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 DENND5BQ6ZUT9 1274 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 RASGRP2Q7LDG7 609 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 ZDHHC9Q9Y397 364 aa10.8□□□□□ -0.68
COL4A6-203ENST00000394872 SOAT2O75908 522 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 THP07101 528 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 ZNF286BP0CG31 522 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 FDFT1P37268 417 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 AVPR1AP37288 418 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 RAP1GAPP47736 663 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 FXR1P51114 621 aaKnown RBP eCLIP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 MAP3K7CLP57077 242 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 KCNK10P57789 538 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 CNGA3Q16281 694 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 JAMLQ86YT9 394 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 PRPF18Q99633 342 aaKnown RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 OSBPL1AQ9BXW6 950 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 PXMP2Q9NR77 195 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 ALG6Q9Y672 507 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 LRRIQ3A6PVS8 624 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 ALOX15P16050 662 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 ERFP50548 548 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 RPL10AP62906 217 aaKnown RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 USP49Q70CQ1 688 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 MTFR1LQ9H019 292 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 PPCSQ9HAB8 311 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 TRPM5Q9NZQ8 1165 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 PCDHB12Q9Y5F1 795 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 SMAPO00193 183 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 GUCA1CO95843 209 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 MLNP12872 115 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 KLRC1P26715 233 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 NUMBP49757 651 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 CENPPQ6IPU0 288 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 VPS37AQ8NEZ2 397 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 DDI1Q8WTU0 396 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 IL1RL2Q9HB29 575 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 EIF4E1BA6NMX2 242 aaKnown RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 ARP10275 920 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 ACADMP11310 421 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 DNAJB2P25686 324 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 MDH1P40925 334 aaKnown RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 ATXN3P54252 364 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 OXCT1P55809 520 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 EIF2B5Q13144 721 aaKnown RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 HERC6Q8IVU3 1022 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 DAGLBQ8NCG7 672 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms