RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 HUS1O60921 280 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 CCNE2O96020 404 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 MYCP01106 439 aaPredicted RBP5.96□□□□□ -1.46
RFFL-202ENST00000394597 CALB1P05937 261 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 ATP6V1B1P15313 513 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 YY1P25490 414 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 ICAM3P32942 547 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 KRT81Q14533 505 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 SPRYD7Q5W111 196 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 OR6B2Q6IFH4 312 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 KRT80Q6KB66 452 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 MTHFD1LQ6UB35 978 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 LRRC55Q6ZSA7 311 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 MAP4K3Q8IVH8 894 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 CD302Q8IX05 232 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 GRK7Q8WTQ7 553 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 SOCS4Q8WXH5 440 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 LENG9Q96B70 501 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 ZNF570Q96NI8 536 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 PLEKHG4BQ96PX9 1271 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 TRIM55Q9BYV6 548 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 PORCNQ9H237 461 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 PREBQ9HCU5 417 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 TIAM2Q8IVF5 1701 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 NAV1Q8NEY1 1877 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 HNRNPCL1O60812 293 aaKnown RBP5.96□□□□□ -1.46
RFFL-202ENST00000394597 STK10O94804 968 aaKnown RBP5.96□□□□□ -1.46
RFFL-202ENST00000394597 PLEKP08567 350 aaPredicted RBP5.96□□□□□ -1.46
RFFL-202ENST00000394597 HOXC6P09630 235 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 KCNA2P16389 499 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 YBX3P16989 372 aaKnown RBP eCLIP5.96□□□□□ -1.46
RFFL-202ENST00000394597 GALCP54803 685 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 CYP24A1Q07973 514 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 MTA1Q13330 715 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 LBRQ14739 615 aaKnown RBP5.96□□□□□ -1.46
RFFL-202ENST00000394597 TMEM132DQ14C87 1099 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 UGCGQ16739 394 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 BMT2Q1RMZ1 405 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 SLC5A9Q2M3M2 681 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 MPZL3Q6UWV2 235 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 ZNF662Q6ZS27 426 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 ANO5Q75V66 913 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 TRIM50Q86XT4 487 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 ZNF354CQ86Y25 554 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 PASD1Q8IV76 773 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 RFFLQ8WZ73 363 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 COPS5Q92905 334 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 SLC35C1Q96A29 364 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 DDX50Q9BQ39 737 aaKnown RBP5.96□□□□□ -1.46
RFFL-202ENST00000394597 CCDC68Q9H2F9 335 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 KCTD10Q9H3F6 313 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 ZWILCHQ9H900 591 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 IL1RAPL1Q9NZN1 696 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 WDR35Q9P2L0 1181 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 ANAPC7Q9UJX3 599 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 ZNF148Q9UQR1 794 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 R3HDM2Q9Y2K5 976 aaKnown RBP5.96□□□□□ -1.46
RFFL-202ENST00000394597 TMA7Q9Y2S6 64 aaKnown RBP5.96□□□□□ -1.46
RFFL-202ENST00000394597 SH3GLB1Q9Y371 365 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 ZNF831Q5JPB2 1677 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 EXOC1LA0A1B0GW35 172 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 FOXN3O00409 490 aaPredicted RBP5.95□□□□□ -1.46
RFFL-202ENST00000394597 ZC3H11AO75152 810 aaKnown RBP eCLIP5.95□□□□□ -1.46
RFFL-202ENST00000394597 ATF2P15336 505 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 FECHP22830 423 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 NCALDP61601 193 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 PSMC1P62191 440 aaKnown RBP5.95□□□□□ -1.46
RFFL-202ENST00000394597 DSG1Q02413 1049 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 THOC5Q13769 683 aaKnown RBP5.95□□□□□ -1.46
RFFL-202ENST00000394597 RABGAP1LQ5R372 815 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 ERMARDQ5T6L9 678 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 NOTUMQ6P988 496 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 SLC26A7Q8TE54 656 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 THAP11Q96EK4 314 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 TMEM237Q96Q45 408 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 C11orf70Q9BRQ4 267 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 NUP85Q9BW27 656 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 CELF4Q9BZC1 486 aaKnown RBP5.95□□□□□ -1.46
RFFL-202ENST00000394597 TMEM134Q9H6X4 195 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 LMCD1Q9NZU5 365 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 RBPJLQ9UBG7 517 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 BCAP29Q9UHQ4 241 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 STRIP2Q9ULQ0 834 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 PCDHB2Q9Y5E7 798 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 COMMD3-BMI1R4GMX3 469 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 A0A087WZ62 844 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 PODXLO00592 558 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 PEX10O60683 326 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 KRT75O95678 551 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 LGALS2P05162 132 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 ZNF286BP0CG31 522 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 SERPINB8P50452 374 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 RTP1P59025 263 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 TBL3Q12788 808 aaKnown RBP5.95□□□□□ -1.46
RFFL-202ENST00000394597 MAP2K5Q13163 448 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 ZNF268Q14587 947 aaPredicted RBP5.95□□□□□ -1.46
RFFL-202ENST00000394597 GRIK4Q16099 956 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 INAQ16352 499 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 LONRF1Q17RB8 773 aa5.95□□□□□ -1.46
RFFL-202ENST00000394597 FAM110CQ1W6H9 321 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms