RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 NR1D1P20393 614 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 ADCY8P40145 1251 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 ITGA8P53708 1063 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 DYNLT1P63172 113 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 ZBTB6Q15916 424 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 CCNG2Q16589 344 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 DCAF4L1Q3SXM0 396 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 ZNF618Q5T7W0 954 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 TRNP1Q6NT89 227 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 NOTUMQ6P988 496 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 TRPV1Q8NER1 839 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 SLCO2A1Q92959 643 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 DDX23Q9BUQ8 820 aaKnown RBP15.89■□□□□ 0.13
GPC3-202ENST00000394299 ARHGAP39Q9C0H5 1083 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 DPEP3Q9H4B8 488 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 NEU2Q9Y3R4 380 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 GOLGA6L10A6NI86 522 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 E5RJQ4 531 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 HAS3O00219 553 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 TNPO2O14787 897 aaKnown RBP15.89■□□□□ 0.13
GPC3-202ENST00000394299 CAND2O75155 1236 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 INCA1Q0VD86 236 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 CALCOCO2Q13137 446 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 KYAT1Q16773 422 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 LEKR1Q6ZMV7 388 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 MAIP1Q8WWC4 291 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 NT5C1AQ9BXI3 368 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 PARP2Q9UGN5 583 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 STRIP2Q9ULQ0 834 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 MANSC4A6NHS7 340 aaPredicted RBP15.88■□□□□ 0.13
GPC3-202ENST00000394299 GRIN2DO15399 1336 aa15.88■□□□□ 0.13
GPC3-202ENST00000394299 SHOX2O60902 331 aaPredicted RBP15.88■□□□□ 0.13
GPC3-202ENST00000394299 PDGFRBP09619 1106 aa15.88■□□□□ 0.13
GPC3-202ENST00000394299 SLCO1A2P46721 670 aa15.88■□□□□ 0.13
GPC3-202ENST00000394299 SLC25A11Q02978 314 aaKnown RBP15.88■□□□□ 0.13
GPC3-202ENST00000394299 CRHR2Q13324 411 aa15.88■□□□□ 0.13
GPC3-202ENST00000394299 PTK6Q13882 451 aa15.88■□□□□ 0.13
GPC3-202ENST00000394299 RGMBQ6NW40 437 aa15.88■□□□□ 0.13
GPC3-202ENST00000394299 ALKAL1Q6UXT8 129 aa15.88■□□□□ 0.13
GPC3-202ENST00000394299 ARRDC4Q8NCT1 418 aa15.88■□□□□ 0.13
GPC3-202ENST00000394299 RUNDC3BQ96NL0 473 aa15.88■□□□□ 0.13
GPC3-202ENST00000394299 AP5M1Q9H0R1 490 aa15.88■□□□□ 0.13
GPC3-202ENST00000394299 CACNG4Q9UBN1 327 aa15.88■□□□□ 0.13
GPC3-202ENST00000394299 MTRF1LQ9UGC7 380 aaKnown RBP15.88■□□□□ 0.13
GPC3-202ENST00000394299 hCG_1818297A0A087WSY0 165 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 C3orf70A6NLC5 250 aaPredicted RBP15.87■□□□□ 0.13
GPC3-202ENST00000394299 HMGB1P1B2RPK0 211 aaPredicted RBP15.87■□□□□ 0.13
GPC3-202ENST00000394299 SPTLC1O15269 473 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 CDKN2BP42772 138 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 YARSP54577 528 aaKnown RBP15.87■□□□□ 0.13
GPC3-202ENST00000394299 SOX4Q06945 474 aaPredicted RBP15.87■□□□□ 0.13
GPC3-202ENST00000394299 MYO1EQ12965 1108 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 C15orf59Q2T9L4 293 aaPredicted RBP15.87■□□□□ 0.13
GPC3-202ENST00000394299 GOLGA7BQ2TAP0 167 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 ODF2Q5BJF6 829 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 FAM102AQ5T9C2 384 aaPredicted RBP15.87■□□□□ 0.13
GPC3-202ENST00000394299 OR6B2Q6IFH4 312 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 PMF1Q6P1K2 205 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 B4GALNT4Q76KP1 1039 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 GSTA5Q7RTV2 222 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 TTC30AQ86WT1 665 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 SMIM28A0A1B0GU29 152 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 LIASO43766 372 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 GABBR2O75899 941 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 HMGCRP04035 888 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 C6orf222P0C671 652 aaPredicted RBP15.87■□□□□ 0.13
GPC3-202ENST00000394299 LMO2P25791 158 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 MAGOHP61326 146 aaKnown RBP15.87■□□□□ 0.13
GPC3-202ENST00000394299 SKOR1P84550 965 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 ZNF268Q14587 947 aaPredicted RBP15.87■□□□□ 0.13
GPC3-202ENST00000394299 FSCN1Q16658 493 aaKnown RBP15.87■□□□□ 0.13
GPC3-202ENST00000394299 SOWAHAQ2M3V2 549 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 UBXN11Q5T124 520 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 RHBDF2Q6PJF5 856 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 KDM7AQ6ZMT4 941 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 FAM183BPQ6ZVS7 135 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 C7orf31Q8N865 590 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 NIPA2Q8N8Q9 360 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 OR6B3Q8NGW1 331 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 MCRS1Q96EZ8 462 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 SNF8Q96H20 258 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 RBM41Q96IZ5 413 aaKnown RBP15.87■□□□□ 0.13
GPC3-202ENST00000394299 ZNF148Q9UQR1 794 aa15.87■□□□□ 0.13
GPC3-202ENST00000394299 MEIS3P2A8K0S8 358 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 RIPK2O43353 540 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 ACSL3O95573 720 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 GAS8O95995 478 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 MIPP30301 263 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 RGS2P41220 211 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 CPT1AP50416 773 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 TAP1Q03518 808 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 CDO1Q16878 200 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 CCDC142Q17RM4 750 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 LRRC38Q5VT99 294 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 C9orf57Q5W0N0 161 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 DENND2CQ68D51 928 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 CHADLQ6NUI6 762 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 LCLAT1Q6UWP7 414 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 B3GNT5Q9BYG0 378 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 PLEKHA5Q9HAU0 1116 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms