RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ZBTB33Q86T24 672 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 XXYLT1Q8NBI6 393 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 SCFD2Q8WU76 684 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 STARD13Q9Y3M8 1113 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 CD3EAPO15446 510 aaKnown RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 CNPP09543 421 aaKnown RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 HIRAP54198 1017 aaPredicted RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 ZNF846Q147U1 533 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 CCDC17Q96LX7 622 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 DDX47Q9H0S4 455 aaKnown RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 TLR7Q9NYK1 1049 aaKnown RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 TRPC4Q9UBN4 977 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 USP17L12C9JPN9 530 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 USP17L21D6R901 530 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 SOAT2O75908 522 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 PDIA3P30101 505 aaKnown RBP13.9□□□□□ -0.18
USP49-203ENST00000394253 ARF3P61204 181 aaPredicted RBP13.9□□□□□ -0.18
USP49-203ENST00000394253 S100A12P80511 92 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 ARF1P84077 181 aaKnown RBP13.9□□□□□ -0.18
USP49-203ENST00000394253 ZRANB3Q5FWF4 1079 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 SPICE1Q8N0Z3 855 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 NEU2Q9Y3R4 380 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 A0A087WXM4 84 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 Q4G0T1 1027 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 AKAP14Q86UN6 197 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 OR7A2PQ8NGA2 310 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 ACEP12821 1306 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 PRLP01236 227 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 FASP25445 335 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 CDK17Q00537 523 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 CLEC16AQ2KHT3 1053 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 ACSBG1Q96GR2 724 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 DHX35Q9H5Z1 703 aaKnown RBP13.9□□□□□ -0.18
USP49-203ENST00000394253 SH3GLB2Q9NR46 395 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 ESYT3A0FGR9 886 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 PHKA2P46019 1235 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 PIGHQ14442 188 aaPredicted RBP13.9□□□□□ -0.18
USP49-203ENST00000394253 USP10Q14694 798 aaKnown RBP13.9□□□□□ -0.18
USP49-203ENST00000394253 QPRTQ15274 297 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 C3orf62Q6ZUJ4 267 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 TCAIMQ8N3R3 496 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 DSEQ9UL01 958 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 POLIQ9UNA4 740 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 SFI1A8K8P3 1242 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 O00370 1275 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 DPYSL4O14531 572 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 NR3C1P04150 777 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 RESP18Q5W5W9 173 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 PGBD2Q6P3X8 592 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 EIF3MQ7L2H7 374 aaKnown RBP13.9□□□□□ -0.18
USP49-203ENST00000394253 GGT7Q9UJ14 662 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 GSAPA4D1B5 854 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 TSPAN19P0C672 248 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 ARHGEF7Q14155 803 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 GCKRQ14397 625 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 GALNT3Q14435 633 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 UNC13DQ70J99 1090 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 ARHGEF19Q8IW93 802 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 TRAPPC8Q9Y2L5 1435 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 KNTC1P50748 2209 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 STK25O00506 426 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 SRP54P61011 504 aaKnown RBP13.9□□□□□ -0.18
USP49-203ENST00000394253 PSMA8Q8TAA3 256 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 WDR12Q9GZL7 423 aaKnown RBP13.9□□□□□ -0.18
USP49-203ENST00000394253 TRMT6Q9UJA5 497 aaKnown RBP13.9□□□□□ -0.18
USP49-203ENST00000394253 ASAP1Q9ULH1 1129 aa13.9□□□□□ -0.18
USP49-203ENST00000394253 AP3D1O14617 1153 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 FAM20BO75063 409 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 LBPP18428 481 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 ADD1P35611 737 aaKnown RBP13.89□□□□□ -0.19
USP49-203ENST00000394253 SWI5Q1ZZU3 235 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 FAM167AQ96KS9 214 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 OSBPL11Q9BXB4 747 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 MCUBQ9NWR8 336 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 PRELID1Q9Y255 219 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 POLR1AO95602 1720 aaPredicted RBP13.89□□□□□ -0.19
USP49-203ENST00000394253 BCLAF3A2AJT9 711 aaKnown RBP13.89□□□□□ -0.19
USP49-203ENST00000394253 PTGS2P35354 604 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 FAUP35544 74 aaKnown RBP13.89□□□□□ -0.19
USP49-203ENST00000394253 CBX5P45973 191 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 SCTRP47872 440 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 RPS6KA3P51812 740 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 TTLL9Q3SXZ7 439 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 PTRHD1Q6GMV3 140 aaKnown RBP13.89□□□□□ -0.19
USP49-203ENST00000394253 TBCKQ8TEA7 893 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 CMTM6Q9NX76 183 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 POTEMA6NI47 508 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 FTLP02792 175 aaPredicted RBP13.89□□□□□ -0.19
USP49-203ENST00000394253 IL5RAQ01344 420 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 POTEHQ6S545 545 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 POTEGQ6S5H5 508 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 MAGEB18Q96M61 343 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 RPAP1Q9BWH6 1393 aaPredicted RBP13.89□□□□□ -0.19
USP49-203ENST00000394253 SP100P23497 879 aaPredicted RBP13.89□□□□□ -0.19
USP49-203ENST00000394253 CCDC115Q96NT0 180 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 KCTD14Q9BQ13 255 aaPredicted RBP13.89□□□□□ -0.19
USP49-203ENST00000394253 ROGDIQ9GZN7 287 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 PNPLA8Q9NP80 782 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 DGKIO75912 1065 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 ZNF682O95780 498 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms