RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 A8MXQ7 604 aa32.83■■■□□ 2.85
CMTM4-202ENST00000394106 CSH1P0DML2 217 aa32.83■■■□□ 2.85
CMTM4-202ENST00000394106 CSH2P0DML3 217 aa32.83■■■□□ 2.85
CMTM4-202ENST00000394106 HMGA1P17096 107 aaKnown RBP32.83■■■□□ 2.85
CMTM4-202ENST00000394106 GCLMP48507 274 aa32.83■■■□□ 2.85
CMTM4-202ENST00000394106 CDH8P55286 799 aa32.83■■■□□ 2.85
CMTM4-202ENST00000394106 PFKPQ01813 784 aa32.83■■■□□ 2.85
CMTM4-202ENST00000394106 SGSM1Q2NKQ1 1148 aa32.83■■■□□ 2.85
CMTM4-202ENST00000394106 COBLL1Q53SF7 1204 aa32.83■■■□□ 2.85
CMTM4-202ENST00000394106 ELOA2Q8IYF1 753 aaPredicted RBP32.83■■■□□ 2.85
CMTM4-202ENST00000394106 FAM122AQ96E09 287 aa32.83■■■□□ 2.85
CMTM4-202ENST00000394106 GTPBP4Q9BZE4 634 aaKnown RBP32.83■■■□□ 2.85
CMTM4-202ENST00000394106 DPEP3Q9H4B8 488 aa32.83■■■□□ 2.85
CMTM4-202ENST00000394106 CETN3O15182 167 aa32.82■■■□□ 2.84
CMTM4-202ENST00000394106 HLA-DRAP01903 254 aa32.82■■■□□ 2.84
CMTM4-202ENST00000394106 VITQ6UXI7 678 aa32.82■■■□□ 2.84
CMTM4-202ENST00000394106 PRSS33Q8NF86 280 aa32.82■■■□□ 2.84
CMTM4-202ENST00000394106 MYCBPAPQ8TBZ2 947 aa32.82■■■□□ 2.84
CMTM4-202ENST00000394106 PCED1BQ96HM7 432 aa32.82■■■□□ 2.84
CMTM4-202ENST00000394106 TRPV4Q9HBA0 871 aa32.82■■■□□ 2.84
CMTM4-202ENST00000394106 UTP3Q9NQZ2 479 aaKnown RBP eCLIP32.82■■■□□ 2.84
CMTM4-202ENST00000394106 MAN1B1Q9UKM7 699 aa32.82■■■□□ 2.84
CMTM4-202ENST00000394106 PI15O43692 258 aa32.81■■■□□ 2.84
CMTM4-202ENST00000394106 PTPN1P18031 435 aaKnown RBP32.81■■■□□ 2.84
CMTM4-202ENST00000394106 BDNFP23560 247 aa32.81■■■□□ 2.84
CMTM4-202ENST00000394106 MAGEA11P43364 429 aa32.81■■■□□ 2.84
CMTM4-202ENST00000394106 PPP3CAQ08209 521 aa32.81■■■□□ 2.84
CMTM4-202ENST00000394106 ADSSL1Q8N142 457 aa32.81■■■□□ 2.84
CMTM4-202ENST00000394106 MKNK1Q9BUB5 465 aa32.81■■■□□ 2.84
CMTM4-202ENST00000394106 TRMT61BQ9BVS5 477 aaKnown RBP32.81■■■□□ 2.84
CMTM4-202ENST00000394106 SLC38A8A6NNN8 435 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 EPB41P11171 864 aaKnown RBP32.8■■■□□ 2.84
CMTM4-202ENST00000394106 P4HA1P13674 534 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 AOC1P19801 751 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 PLA2G5P39877 138 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 NLRP12P59046 1061 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 SLC44A4Q53GD3 710 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 ANKRD40Q6AI12 368 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 SPOPLQ6IQ16 392 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 ARID3BQ8IVW6 561 aaPredicted RBP32.8■■■□□ 2.84
CMTM4-202ENST00000394106 TAF4BQ92750 862 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 PRRX2Q99811 253 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 SDCBP2Q9H190 292 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 TASP1Q9H6P5 420 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 BRD9Q9H8M2 597 aa32.8■■■□□ 2.84
CMTM4-202ENST00000394106 NCANO14594 1321 aa32.79■■■□□ 2.84
CMTM4-202ENST00000394106 HEPACAM2A8MVW5 462 aa32.79■■■□□ 2.84
CMTM4-202ENST00000394106 PSMC3P17980 439 aa32.79■■■□□ 2.84
CMTM4-202ENST00000394106 GRIK1P39086 918 aa32.79■■■□□ 2.84
CMTM4-202ENST00000394106 PMS1P54277 932 aaKnown RBP32.79■■■□□ 2.84
CMTM4-202ENST00000394106 STIM1Q13586 685 aa32.79■■■□□ 2.84
CMTM4-202ENST00000394106 MLF2Q15773 248 aaPredicted RBP32.79■■■□□ 2.84
CMTM4-202ENST00000394106 RSPRY1Q96DX4 576 aa32.79■■■□□ 2.84
CMTM4-202ENST00000394106 SHDQ96IW2 340 aa32.79■■■□□ 2.84
CMTM4-202ENST00000394106 TRIM49BA6NDI0 452 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 NOL4O94818 638 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 ASS1P00966 412 aaKnown RBP32.78■■■□□ 2.84
CMTM4-202ENST00000394106 GDI1P31150 447 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 ENPEPQ07075 957 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 VSTM1Q6UX27 236 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 TMEM150AQ86TG1 271 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 B3GALNT2Q8NCR0 500 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 TAS1R2Q8TE23 839 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 DEPDC1BQ8WUY9 529 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 E2F7Q96AV8 911 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 IMPG2Q9BZV3 1241 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 PTPRDP23468 1912 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 COL4A3Q01955 1670 aa32.78■■■□□ 2.84
CMTM4-202ENST00000394106 NUP210Q8TEM1 1887 aaPredicted RBP32.78■■■□□ 2.84
CMTM4-202ENST00000394106 DPYSL4O14531 572 aa32.77■■■□□ 2.84
CMTM4-202ENST00000394106 F11P03951 625 aa32.77■■■□□ 2.84
CMTM4-202ENST00000394106 ANXA13P27216 316 aa32.77■■■□□ 2.84
CMTM4-202ENST00000394106 UBE2HP62256 183 aa32.77■■■□□ 2.84
CMTM4-202ENST00000394106 PHLDB3Q6NSJ2 640 aa32.77■■■□□ 2.84
CMTM4-202ENST00000394106 MFSD6LQ8IWD5 586 aa32.77■■■□□ 2.84
CMTM4-202ENST00000394106 UXTQ9UBK9 157 aaPredicted RBP32.77■■■□□ 2.84
CMTM4-202ENST00000394106 MUC6Q6W4X9 2439 aa32.76■■■□□ 2.84
CMTM4-202ENST00000394106 BIN1O00499 593 aa32.76■■■□□ 2.83
CMTM4-202ENST00000394106 PSMA7O14818 248 aa32.76■■■□□ 2.83
CMTM4-202ENST00000394106 FKBP3Q00688 224 aaKnown RBP32.76■■■□□ 2.83
CMTM4-202ENST00000394106 YAF2Q8IY57 180 aa32.76■■■□□ 2.83
CMTM4-202ENST00000394106 SLC46A2Q9BY10 475 aa32.76■■■□□ 2.83
CMTM4-202ENST00000394106 FOXQ1Q9C009 403 aa32.76■■■□□ 2.83
CMTM4-202ENST00000394106 TMEM8AQ9HCN3 771 aa32.76■■■□□ 2.83
CMTM4-202ENST00000394106 OBSL1O75147 1896 aa32.76■■■□□ 2.83
CMTM4-202ENST00000394106 DENND4CQ5VZ89 1909 aa32.75■■■□□ 2.83
CMTM4-202ENST00000394106 STARD6P59095 220 aa32.75■■■□□ 2.83
CMTM4-202ENST00000394106 PRKCQQ04759 706 aa32.75■■■□□ 2.83
CMTM4-202ENST00000394106 LRRC63Q05C16 580 aa32.75■■■□□ 2.83
CMTM4-202ENST00000394106 MAB21L3Q8N8X9 362 aa32.75■■■□□ 2.83
CMTM4-202ENST00000394106 MRPS31Q92665 395 aaKnown RBP32.75■■■□□ 2.83
CMTM4-202ENST00000394106 DNASE1L2Q92874 299 aa32.75■■■□□ 2.83
CMTM4-202ENST00000394106 TRMT2BQ96GJ1 504 aaKnown RBP32.75■■■□□ 2.83
CMTM4-202ENST00000394106 B3GNT5Q9BYG0 378 aa32.75■■■□□ 2.83
CMTM4-202ENST00000394106 ZNF518BQ9C0D4 1074 aa32.75■■■□□ 2.83
CMTM4-202ENST00000394106 SMG9Q9H0W8 520 aaKnown RBP32.75■■■□□ 2.83
CMTM4-202ENST00000394106 HEBP1Q9NRV9 189 aa32.75■■■□□ 2.83
CMTM4-202ENST00000394106 CLDN5O00501 218 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 ZNF263O14978 683 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 TRIM66O15016 1216 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms