RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ZHX3Q9H4I2 956 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 ECT2Q9H8V3 914 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 ABCB6Q9NP58 842 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 L1RE1Q9UN81 338 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 MAGED2Q9UNF1 606 aaPredicted RBP16.55■□□□□ 0.24
CHMP3-202ENST00000393773 MYOFQ9NZM1 2061 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 DCLK1O15075 740 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 PRPF40AO75400 957 aaKnown RBP16.54■□□□□ 0.24
CHMP3-202ENST00000393773 IL18RAPO95256 599 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 APBB3O95704 486 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 KRT18P05783 430 aaKnown RBP16.54■□□□□ 0.24
CHMP3-202ENST00000393773 NEFLP07196 543 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 UBA7P41226 1012 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 AMPD2Q01433 879 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 FAM160A1Q05DH4 1040 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 DMC1Q14565 340 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 NFE2Q16621 373 aaPredicted RBP16.54■□□□□ 0.24
CHMP3-202ENST00000393773 EML3Q32P44 896 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 INTS6LQ5JSJ4 861 aaKnown RBP16.54■□□□□ 0.24
CHMP3-202ENST00000393773 RNF43Q68DV7 783 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 SLFN12LQ6IEE8 588 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 CC2D1AQ6P1N0 951 aaPredicted RBP16.54■□□□□ 0.24
CHMP3-202ENST00000393773 NT5DC4Q86YG4 428 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 CXorf38Q8TB03 319 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 OSCP1Q8WVF1 389 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 LARP4BQ92615 738 aaKnown RBP16.54■□□□□ 0.24
CHMP3-202ENST00000393773 ACDQ96AP0 544 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 HVCN1Q96D96 273 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 MYRFLQ96LU7 910 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 STRA6Q9BX79 667 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 TMEM206Q9H813 350 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 EBF1Q9UH73 591 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 WNT6Q9Y6F9 365 aa16.54■□□□□ 0.24
CHMP3-202ENST00000393773 ASCC3Q8N3C0 2202 aaKnown RBP16.53■□□□□ 0.24
CHMP3-202ENST00000393773 BCLAF3A2AJT9 711 aaKnown RBP16.53■□□□□ 0.24
CHMP3-202ENST00000393773 ACAT1P24752 427 aaKnown RBP16.53■□□□□ 0.24
CHMP3-202ENST00000393773 CYP2F1P24903 491 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 POLR2BP30876 1174 aaKnown RBP16.53■□□□□ 0.24
CHMP3-202ENST00000393773 PNPLA4P41247 253 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 ELF2Q15723 593 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 DDR2Q16832 855 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 SCARA3Q6AZY7 606 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 PSAPL1Q6NUJ1 521 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 SFR1Q86XK3 245 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 BRSK2Q8IWQ3 736 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 C1orf127Q8N9H9 656 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 ZSWIM2Q8NEG5 633 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 CD101Q93033 1021 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 ATP2A3Q93084 1043 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 FAM84AQ96KN4 292 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 ACBD6Q9BR61 282 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 TRPC7Q9HCX4 862 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 DUS2Q9NX74 493 aaKnown RBP16.53■□□□□ 0.24
CHMP3-202ENST00000393773 UXTQ9UBK9 157 aaPredicted RBP16.53■□□□□ 0.24
CHMP3-202ENST00000393773 BAHCC1Q9P281 2608 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 PKD1L2Q7Z442 2459 aa16.53■□□□□ 0.24
CHMP3-202ENST00000393773 PI4KAP42356 2102 aa16.52■□□□□ 0.24
CHMP3-202ENST00000393773 LNP1A1A4G5 178 aa16.52■□□□□ 0.24
CHMP3-202ENST00000393773 HCRTO43612 131 aa16.52■□□□□ 0.24
CHMP3-202ENST00000393773 ITGB3P05106 788 aa16.52■□□□□ 0.24
CHMP3-202ENST00000393773 GJB2P29033 226 aa16.52■□□□□ 0.24
CHMP3-202ENST00000393773 LONP1P36776 959 aaKnown RBP16.52■□□□□ 0.24
CHMP3-202ENST00000393773 CFAP221Q4G0U5 840 aa16.52■□□□□ 0.24
CHMP3-202ENST00000393773 PMS2CLQ68D20 193 aa16.52■□□□□ 0.24
CHMP3-202ENST00000393773 OSTM1Q86WC4 334 aa16.52■□□□□ 0.24
CHMP3-202ENST00000393773 POMGNT1Q8WZA1 660 aa16.52■□□□□ 0.24
CHMP3-202ENST00000393773 DDX43Q9NXZ2 648 aaKnown RBP16.52■□□□□ 0.24
CHMP3-202ENST00000393773 GCNT4Q9P109 453 aa16.52■□□□□ 0.24
CHMP3-202ENST00000393773 DMXL2Q8TDJ6 3036 aa16.52■□□□□ 0.23
CHMP3-202ENST00000393773 CACNA1GO43497 2377 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 DSPP15924 2871 aaKnown RBP16.51■□□□□ 0.23
CHMP3-202ENST00000393773 C2orf78A6NCI8 922 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 GIPC1O14908 333 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 RHOBTB1O94844 696 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 CKMP06732 381 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 USP17L7P0C7H9 530 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 TCF3P15923 654 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 IFNAR2P48551 515 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 RPL10AP62906 217 aaKnown RBP16.51■□□□□ 0.23
CHMP3-202ENST00000393773 CREB5Q02930 508 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 KCNA1Q09470 495 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 ZNF720Q7Z2F6 126 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 RASSF3Q86WH2 238 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 TMEM86AQ8N2M4 240 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 LRRC52Q8N7C0 313 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 EXOC4Q96A65 974 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 SAAL1Q96ER3 474 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 CYP2S1Q96SQ9 504 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 RALYQ9UKM9 306 aaKnown RBP16.51■□□□□ 0.23
CHMP3-202ENST00000393773 WASF3Q9UPY6 502 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 NBEAQ8NFP9 2946 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 ADAMTS9Q9P2N4 1935 aa16.51■□□□□ 0.23
CHMP3-202ENST00000393773 TRAV19A0A0A6YYK7 116 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 H3BQV1 296 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 CD2BP2O95400 341 aaKnown RBP16.5■□□□□ 0.23
CHMP3-202ENST00000393773 PROS1P07225 676 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 CHRM1P11229 460 aaPredicted RBP16.5■□□□□ 0.23
CHMP3-202ENST00000393773 NOVA1P51513 510 aaKnown RBP16.5■□□□□ 0.23
CHMP3-202ENST00000393773 TFAMQ00059 246 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms