RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 HSPA1LP34931 641 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 KIF6Q6ZMV9 814 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 TAX1BP1Q86VP1 789 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 AFAP1Q8N556 730 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 HIST1H2AHQ96KK5 128 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 HIST1H2AJQ99878 128 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 C1orf43Q9BWL3 253 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 TEX12Q9BXU0 123 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 EPB41L4BQ9H329 900 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 RAI14Q9P0K7 980 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 USP36Q9P275 1121 aaKnown RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 PGAP2Q9UHJ9 254 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 ATP6V1HQ9UI12 483 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 FPGT-TNNI3KV9GXZ4 949 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 SMIM30A4D0T7 59 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 CTAGE15A4D2H0 777 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 SPATA31C2B4DYI2 1134 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 GPR89AB7ZAQ6 455 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 H7C4K7 107 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 ZBTB14O43829 449 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 KLHL41O60662 606 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 PDE8BO95263 885 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 CST3P01034 146 aaPredicted RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 GPR89BP0CG08 455 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 CTAGE8P0CG41 777 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 PEPDP12955 493 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 IGHMBP2P38935 993 aaKnown RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 EPHB4P54760 987 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 POLE2P56282 527 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 BFSP2Q13515 415 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 PPP1R7Q15435 360 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 SKIDA1Q1XH10 827 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 ESRP1Q6NXG1 681 aaKnown RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 LRRC8DQ7L1W4 858 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 UBE3DQ7Z6J8 389 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 CTAGE6Q86UF2 777 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 CCDC103Q8IW40 242 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 CTAGE4Q8IX94 777 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 TOP6BLQ8N6T0 577 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 DNAJC5GQ8N7S2 189 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 OR6Y1Q8NGX8 325 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 SNIP1Q8TAD8 396 aaKnown RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 CALML6Q8TD86 181 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 FCRL3Q96P31 734 aaPredicted RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 KCNF1Q9H3M0 494 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 MTG2Q9H4K7 406 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 SLC32A1Q9H598 525 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 CCDC134Q9H6E4 229 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 ADAMTS8Q9UP79 889 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 DYRK1BQ9Y463 629 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 FAM171A2A8MVW0 826 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 H3BNC9 293 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 MATN4O95460 622 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 MRPS9P82933 396 aaKnown RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 GPS1Q13098 491 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 MAPK11Q15759 364 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 PKN2Q16513 984 aaKnown RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 PMF1Q6P1K2 205 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 PPP1R21Q6ZMI0 780 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 MTERF4Q7Z6M4 381 aaKnown RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 DNAAF5Q86Y56 855 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.78□□□□□ -1.87e-7■□□□□ 10.3
XRN1-202ENST00000392981 CCDC13Q8IYE1 715 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 PQLC1Q8N2U9 271 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 LRRC71Q8N4P6 559 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 LILRB1Q8NHL6 650 aaPredicted RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 ADAMTS15Q8TE58 950 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 PIGOQ8TEQ8 1089 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 ABHD1Q96SE0 405 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 MCMBPQ9BTE3 642 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 CTNNAL1Q9UBT7 734 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 TCFL5Q9UL49 500 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 PMF1-BGLAPU3KQ54 211 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 LINC00854A0A1B0GVQ3 168 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 UBXN8O00124 270 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 MTX2O75431 263 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 CTSBP07858 339 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 SNRNP70P08621 437 aaKnown RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 MTNR1BP49286 362 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 AGFG1P52594 562 aaKnown RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 C2orf76Q3KRA6 126 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 CCDC40Q4G0X9 1142 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 KRT40Q6A162 431 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 TSPYL5Q86VY4 417 aaPredicted RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 POGLUT1Q8NBL1 392 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 LINS1Q8NG48 757 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 SAAL1Q96ER3 474 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 STAMBPL1Q96FJ0 436 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 CCDC106Q9BWC9 280 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 TMEM140Q9NV12 185 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 STK32BQ9NY57 414 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 IL1RAPL1Q9NZN1 696 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 PAXBP1Q9Y5B6 917 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 LYVE1Q9Y5Y7 322 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 CYP46A1Q9Y6A2 500 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 GUCY1B2O75343 617 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 RB1P06400 928 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 NRIP1P48552 1158 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 MFAP4P55083 255 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 MTTPP55157 894 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms