RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SMAPO00193 183 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 C11orf63Q6NUN7 778 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 MTMR8Q96EF0 704 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 DDIT4Q9NX09 232 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 ACKR2O00590 384 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 IL1RL1Q01638 556 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 RBBP7Q16576 425 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 MIIPQ5JXC2 388 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 SLC25A41Q8N5S1 370 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 ROPN1BQ9BZX4 212 aaPredicted RBP17.31■□□□□ 0.36
SCN3B-202ENST00000392770 ROPN1Q9HAT0 212 aaPredicted RBP17.31■□□□□ 0.36
SCN3B-202ENST00000392770 C2CD2LO14523 706 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 PPP1R37O75864 691 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 LUC7L3O95232 432 aaKnown RBP17.31■□□□□ 0.36
SCN3B-202ENST00000392770 ACO1P21399 889 aaKnown RBP17.31■□□□□ 0.36
SCN3B-202ENST00000392770 PAN2Q504Q3 1202 aaKnown RBP17.31■□□□□ 0.36
SCN3B-202ENST00000392770 TTC30AQ86WT1 665 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 FRMD8P1Q9BZ68 369 aaPredicted RBP17.31■□□□□ 0.36
SCN3B-202ENST00000392770 NDFIP2Q9NV92 336 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 SNHG28P0DPA3 235 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 SATB1Q01826 763 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 SPOCD1Q6ZMY3 1216 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 COPS5Q92905 334 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 ANGPTL2Q9UKU9 493 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 FARP1Q9Y4F1 1045 aaPredicted RBP17.3■□□□□ 0.36
SCN3B-202ENST00000392770 CASTOR2A6NHX0 329 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 PLA2G6O60733 806 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 SLC29A2Q14542 456 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 C4orf22Q6V702 233 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 FAM129AQ9BZQ8 928 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 GNGT2O14610 69 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 SMIM24O75264 130 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 FBXO47Q5MNV8 452 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 TREML2Q5T2D2 321 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 BRSK2Q8IWQ3 736 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 GRAMD1AQ96CP6 724 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 ELMO2Q96JJ3 720 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 MOSPD1Q9UJG1 213 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 SPATA31C1P0DKV0 1188 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 SLC27A1Q6PCB7 646 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 ZNF410Q86VK4 478 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 IPMKQ8NFU5 416 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 SOCS4Q8WXH5 440 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 USP18Q9UMW8 372 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 ARFGEF2Q9Y6D5 1785 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 ALDH7A1P49419 539 aaKnown RBP17.3■□□□□ 0.36
SCN3B-202ENST00000392770 PSEN2P49810 448 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 GCNT1Q02742 428 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 RAD51Q06609 339 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 PDK2Q15119 407 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 MMTAG2Q9BU76 263 aaKnown RBP17.3■□□□□ 0.36
SCN3B-202ENST00000392770 C20orf96Q9NUD7 363 aaPredicted RBP17.3■□□□□ 0.36
SCN3B-202ENST00000392770 PCMTD2Q9NV79 361 aa17.3■□□□□ 0.36
SCN3B-202ENST00000392770 RPSAP08865 295 aaKnown RBP17.29■□□□□ 0.36
SCN3B-202ENST00000392770 SERPINB9P50453 376 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 TTC39BQ5VTQ0 682 aaPredicted RBP17.29■□□□□ 0.36
SCN3B-202ENST00000392770 EMC1Q8N766 993 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 AGR3Q8TD06 166 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 PPCSQ9HAB8 311 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 BARX2Q9UMQ3 279 aaPredicted RBP17.29■□□□□ 0.36
SCN3B-202ENST00000392770 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
SCN3B-202ENST00000392770 ETFBP38117 255 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 ALDH1A3P47895 512 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 BST2Q10589 180 aaKnown RBP17.29■□□□□ 0.36
SCN3B-202ENST00000392770 MEA1Q16626 185 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 DENND5BQ6ZUT9 1274 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 SPATA21Q7Z572 469 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 LHX1P48742 406 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 NDST1P52848 882 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 WDR93Q6P2C0 686 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 MOB2Q70IA6 237 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 CCDC33Q8N5R6 958 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 ZNF473Q8WTR7 871 aaKnown RBP17.29■□□□□ 0.36
SCN3B-202ENST00000392770 PTPRN2Q92932 1015 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 SPDL1Q96EA4 605 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 SPAG6O75602 509 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 AKR1A1P14550 325 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 HARS2P49590 506 aaKnown RBP17.29■□□□□ 0.36
SCN3B-202ENST00000392770 ZBTB18Q99592 522 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 EGFL8Q99944 293 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 EFHD1Q9BUP0 239 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 TMEM134Q9H6X4 195 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.29■□□□□ 0.36
SCN3B-202ENST00000392770 MAP3K7O43318 606 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 MICAL2O94851 1124 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 RPLP2P05387 115 aaKnown RBP17.29■□□□□ 0.36
SCN3B-202ENST00000392770 GLRA2P23416 452 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 EPHB2P29323 1055 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
SCN3B-202ENST00000392770 ZNF710Q8N1W2 664 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 SUN2Q9UH99 717 aa17.29■□□□□ 0.36
SCN3B-202ENST00000392770 H7C4K7 107 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 DDX3XO00571 662 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCN3B-202ENST00000392770 HSPA8P11142 646 aaKnown RBP17.28■□□□□ 0.36
SCN3B-202ENST00000392770 MAP2K2P36507 400 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 GTF2BQ00403 316 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 TMTC4Q5T4D3 741 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 FAXCQ5TGI0 409 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 CHSY1Q86X52 802 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 PPP1R2P1Q96PQ5 205 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms