RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 CASKIN2Q8WXE0 1202 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 GAD1Q99259 594 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 OSBPL7Q9BZF2 842 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 SNX25Q9H3E2 840 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 PTCH2Q9Y6C5 1203 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 ZSCAN5CA6NGD5 496 aaPredicted RBP22.53■■□□□ 1.2
SPHK1-202ENST00000392496 SPDYE4A6NLX3 237 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 THP07101 528 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 PFKMP08237 780 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 GNL1P36915 607 aaPredicted RBP22.53■■□□□ 1.2
SPHK1-202ENST00000392496 AGMOQ6ZNB7 445 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 ZDHHC14Q8IZN3 488 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 SLC43A3Q8NBI5 491 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 EXD1Q8NHP7 514 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.53■■□□□ 1.2
SPHK1-202ENST00000392496 RUNDC3BQ96NL0 473 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 TSPYL2Q9H2G4 693 aaPredicted RBP22.53■■□□□ 1.2
SPHK1-202ENST00000392496 FGFR1P11362 822 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 WARSP23381 471 aaKnown RBP22.53■■□□□ 1.2
SPHK1-202ENST00000392496 RFC1P35251 1148 aaPredicted RBP22.53■■□□□ 1.2
SPHK1-202ENST00000392496 PLA2G4AP47712 749 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 CARSP49589 748 aaKnown RBP22.53■■□□□ 1.2
SPHK1-202ENST00000392496 CUL1Q13616 776 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 SIX1Q15475 284 aaPredicted RBP22.53■■□□□ 1.2
SPHK1-202ENST00000392496 DAB2IPQ5VWQ8 1189 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 VIPAS39Q9H9C1 493 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 HESX1Q9UBX0 185 aa22.53■■□□□ 1.2
SPHK1-202ENST00000392496 A0A0U1RQF3 1178 aa22.52■■□□□ 1.2
SPHK1-202ENST00000392496 FAM187AA6NFU0 413 aa22.52■■□□□ 1.2
SPHK1-202ENST00000392496 MGEA5O60502 916 aa22.52■■□□□ 1.2
SPHK1-202ENST00000392496 SKIP12755 728 aa22.52■■□□□ 1.2
SPHK1-202ENST00000392496 SSR1P43307 286 aaKnown RBP22.52■■□□□ 1.2
SPHK1-202ENST00000392496 TNNT3P45378 269 aaPredicted RBP22.52■■□□□ 1.2
SPHK1-202ENST00000392496 NNTQ13423 1086 aa22.52■■□□□ 1.2
SPHK1-202ENST00000392496 ZNF618Q5T7W0 954 aa22.52■■□□□ 1.2
SPHK1-202ENST00000392496 C12orf50Q8NA57 414 aaPredicted RBP22.52■■□□□ 1.2
SPHK1-202ENST00000392496 LPPQ93052 612 aa22.52■■□□□ 1.2
SPHK1-202ENST00000392496 PLEKHA4Q9H4M7 779 aa22.52■■□□□ 1.2
SPHK1-202ENST00000392496 METTL5Q9NRN9 209 aaKnown RBP22.52■■□□□ 1.2
SPHK1-202ENST00000392496 PCYOX1Q9UHG3 505 aa22.52■■□□□ 1.2
SPHK1-202ENST00000392496 A0A1W2PQ45 241 aaPredicted RBP22.51■■□□□ 1.19
SPHK1-202ENST00000392496 A0A1W2PQY0 241 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 ARL5CA6NH57 179 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 F8VP50 259 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 TTI1O43156 1089 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 RARAP10276 462 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 DR1Q01658 176 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 TTC30AQ86WT1 665 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 ADGRF2Q8IZF7 708 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 JOSD2Q8TAC2 188 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 STK32AQ8WU08 396 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 SEC14L1Q92503 715 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 CAVIN3Q969G5 261 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 MAGOHBQ96A72 148 aaKnown RBP22.51■■□□□ 1.19
SPHK1-202ENST00000392496 PGBD4Q96DM1 585 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 DPEP3Q9H4B8 488 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 ST7Q9NRC1 585 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 FAM49BQ9NUQ9 324 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 MIOSQ9NXC5 875 aa22.51■■□□□ 1.19
SPHK1-202ENST00000392496 TCRBV7S2A1N4TA0A589 114 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 ESYT3A0FGR9 886 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 CAPN15O75808 1086 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 PSMA2P25787 234 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 SNX16P57768 344 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 RCOR2Q8IZ40 523 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 SLC35F5Q8WV83 523 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 IFT81Q8WYA0 676 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 TNIP3Q96KP6 325 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 SLC4A5Q9BY07 1137 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 RAB17Q9H0T7 212 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 UBN1Q9NPG3 1134 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 STARD7Q9NQZ5 370 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 NFU1Q9UMS0 254 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 UTP11Q9Y3A2 253 aaKnown RBP22.5■■□□□ 1.19
SPHK1-202ENST00000392496 PDGFRBP09619 1106 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 CKBP12277 381 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 LMO2P25791 158 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 RPL9P32969 192 aaKnown RBP22.5■■□□□ 1.19
SPHK1-202ENST00000392496 CETN2P41208 172 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 ACAP1Q15027 740 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 RBM41Q96IZ5 413 aaKnown RBP22.5■■□□□ 1.19
SPHK1-202ENST00000392496 ADAM2Q99965 735 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 ACBD3Q9H3P7 528 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 LRRC19Q9H756 370 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 RSAD1Q9HA92 442 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 DDX56Q9NY93 547 aaKnown RBP22.5■■□□□ 1.19
SPHK1-202ENST00000392496 PHF24Q9UPV7 400 aa22.5■■□□□ 1.19
SPHK1-202ENST00000392496 E5RJQ4 531 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 CYB561D2O14569 222 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 FNTAP49354 379 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 SCNN1GP51170 649 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 FAM102AQ5T9C2 384 aaPredicted RBP22.49■■□□□ 1.19
SPHK1-202ENST00000392496 SND1Q7KZF4 910 aaKnown RBP eCLIP22.49■■□□□ 1.19
SPHK1-202ENST00000392496 POLNQ7Z5Q5 900 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 TMEM110Q86TL2 294 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 OSTM1Q86WC4 334 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 CCDC50Q8IVM0 306 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 ANKRD52Q8NB46 1076 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 UBXN6Q9BZV1 441 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 TRPV6Q9H1D0 765 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms