RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 UPP1Q16831 310 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 SEL1L2Q5TEA6 688 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 DAB2IPQ5VWQ8 1189 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 WSCD1Q658N2 575 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 CC2D1AQ6P1N0 951 aaPredicted RBP12.94□□□□□ -0.34
TMCO1-202ENST00000392129 KLHL7Q8IXQ5 586 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 SLC35F5Q8WV83 523 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 DDX27Q96GQ7 796 aaKnown RBP12.94□□□□□ -0.34
TMCO1-202ENST00000392129 MIS12Q9H081 205 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 ST7Q9NRC1 585 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 HESX1Q9UBX0 185 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.94□□□□□ -0.34
TMCO1-202ENST00000392129 NR2E1Q9Y466 385 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 F8VP50 259 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 INPPL1O15357 1258 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 PSTPIP1O43586 416 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 SLC7A5Q01650 507 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 GRIK3Q13003 919 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 BFSP2Q13515 415 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 PMF1Q6P1K2 205 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 RHOT1Q8IXI2 618 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 NIPA2Q8N8Q9 360 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 ANKRD52Q8NB46 1076 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 C3orf58Q8NDZ4 430 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 IPO4Q8TEX9 1081 aaKnown RBP12.94□□□□□ -0.34
TMCO1-202ENST00000392129 FNIP1Q8TF40 1166 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 LINC01599Q8WXQ3 324 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 RUBCNQ92622 972 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 TNIP3Q96KP6 325 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 PAAF1Q9BRP4 392 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 PLVAPQ9BX97 442 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 SLC4A5Q9BY07 1137 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 ARFGAP3Q9NP61 516 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 ZNF446Q9NWS9 450 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 USTQ9Y2C2 406 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 INPP5FQ9Y2H2 1132 aa12.94□□□□□ -0.34
TMCO1-202ENST00000392129 E5RJQ4 531 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 TULP2O00295 520 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 SART1O43290 800 aaKnown RBP12.93□□□□□ -0.34
TMCO1-202ENST00000392129 ZMYND10O75800 440 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 CCDC130P13994 396 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 HSPA6P17066 643 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 AARSP49588 968 aaKnown RBP eCLIP12.93□□□□□ -0.34
TMCO1-202ENST00000392129 TAS2R40P59535 323 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 PDE4CQ08493 712 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 TUSC3Q13454 348 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 GPNMBQ14956 572 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 DSTYKQ6XUX3 929 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 TMEM110Q86TL2 294 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 JOSD2Q8TAC2 188 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 STK32AQ8WU08 396 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 FTHL17Q9BXU8 183 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 STIM2Q9P246 746 aa12.93□□□□□ -0.34
TMCO1-202ENST00000392129 GOLGA6L10A0A0M3HER8 536 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 NBNO60934 754 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 ERLIN1O75477 346 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 B3GAT3O94766 335 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 SEC31AO94979 1220 aaKnown RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 ZRANB2O95218 330 aaKnown RBP eCLIP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 PTPN1P18031 435 aaKnown RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 ADORA2BP29275 332 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 SSR1P43307 286 aaKnown RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 LHX1P48742 406 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 RGS7P49802 495 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 BST2Q10589 180 aaKnown RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 CCNI2Q6ZMN8 369 aaPredicted RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 ADAT2Q7Z6V5 191 aaKnown RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 SLC13A5Q86YT5 568 aaPredicted RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 TMEM86AQ8N2M4 240 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 B3GALNT2Q8NCR0 500 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 HINFPQ9BQA5 517 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 DDX47Q9H0S4 455 aaKnown RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 METTL5Q9NRN9 209 aaKnown RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 RAD51CO43502 376 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 ATP2C2O75185 946 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 GLI1P08151 1106 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 PSMA2P25787 234 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 BCAT1P54687 386 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 SNX16P57768 344 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 PPP2R5EQ16537 467 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 TIGD5Q53EQ6 642 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 BEND6Q5SZJ8 279 aaPredicted RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 FAM102AQ5T9C2 384 aaPredicted RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 LRRC38Q5VT99 294 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 OR6B2Q6IFH4 312 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 GLB1LQ6UWU2 654 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 CD300LGQ6UXG3 332 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 KATNAL2Q8IYT4 538 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 ZDHHC14Q8IZN3 488 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 SLC2A14Q8TDB8 520 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 UROC1Q96N76 676 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 HNRNPABQ99729 332 aaKnown RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 SLITRK6Q9H5Y7 841 aa12.92□□□□□ -0.34
TMCO1-202ENST00000392129 DDX43Q9NXZ2 648 aaKnown RBP12.92□□□□□ -0.34
TMCO1-202ENST00000392129 PIK3R2O00459 728 aa12.91□□□□□ -0.34
TMCO1-202ENST00000392129 FSCN2O14926 492 aa12.91□□□□□ -0.34
TMCO1-202ENST00000392129 PQBP1O60828 265 aaKnown RBP12.91□□□□□ -0.34
TMCO1-202ENST00000392129 GABBR2O75899 941 aa12.91□□□□□ -0.34
TMCO1-202ENST00000392129 HEXIM1O94992 359 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms